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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19808 Canola plastid 93.72 92.75
Bra009829.1-P Field mustard plastid 76.96 71.01
AT5G25280.3 Thale cress plastid 75.92 65.91
Bra028552.1-P Field mustard mitochondrion, plastid 63.87 64.21
Bra008991.1-P Field mustard nucleus, plastid 69.63 60.73
Bra006088.1-P Field mustard plastid 68.59 60.37
Solyc03g117290.1.1 Tomato mitochondrion, plastid 43.46 56.08
KRH52394 Soybean plastid 61.26 54.42
KRH15826 Soybean plastid 51.83 50.51
PGSC0003DMT400073335 Potato plastid 49.74 50.26
KRH05207 Soybean plastid 52.88 49.51
VIT_09s0002g08540.t01 Wine grape plastid 50.79 48.26
Solyc06g068330.1.1 Tomato plastid 48.69 47.21
PGSC0003DMT400096763 Potato plastid 48.17 45.77
KRH61721 Soybean plastid 57.59 41.2
Bra020102.1-P Field mustard plastid 28.8 35.95
Bra006558.1-P Field mustard plastid 28.27 32.34
GSMUA_Achr1P09980_001 Banana plastid 36.65 31.25
Bra002297.1-P Field mustard plastid 23.56 25.42
Protein Annotations
EnsemblPlants:Bra036540.1EnsemblPlants:Bra036540.1-PEnsemblPlantsGene:Bra036540PANTHER:PTHR33132PANTHER:PTHR33132:SF12SEG:seg
UniParc:UPI0002541C87UniProt:M4F631MapMan:35.2:::
Description
AT5G25280 (E=2e-064) | serine-rich protein-related
Coordinates
chrA09:+:1659532..1660107
Molecular Weight (calculated)
20754.4 Da
IEP (calculated)
12.355
GRAVY (calculated)
-0.650
Length
191 amino acids
Sequence
(BLAST)
001: MAVTSSRTRS TASALRSPSS PGFASSTSST FSSRTFFSNH HQPHRSASPT RVNLFASSPL KQSSFRYSID NTRSIAVSKP SASGNKIPDS RRRCMCSPTT
101: HPGSFRCSLH KNVANPHGQG AATAAAYPTN SLNMRRSAMT NSLVRIGGVE GEWVRRALTT LIRPSSHQLK RRSAYQPRPS RLSSMSKADD L
Best Arabidopsis Sequence Match ( AT5G25280.2 )
(BLAST)
001: MAITSSRTTR SNGSASLRSK SPSGRFCGVY SNRMPSSSPS SSGFASSTSS SFSSPSTAFF SSHNQNNHHQ HRSASPTRVN LFTSAPMTQS FRYSIDNRSI
101: SPNRSIAVSS NKPSNHHKIP DSRRRCMCSP TTHPGSFRCS LHKNVANPHG QGTASYTTNG LNMRRSAMTN SLVRIGGVEG EWVRRALTTL IRPSSHQLKR
201: RSAYEPRRSR LASMSKAEDL
Arabidopsis Description
AT5g25280/F18G18_20 [Source:UniProtKB/TrEMBL;Acc:Q93WB2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.