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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 1
  • cytosol 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45090 Canola plastid 100.0 100.0
Bra006558.1-P Field mustard plastid 52.29 47.9
AT5G20370.1 Thale cress mitochondrion 47.71 41.71
Bra002297.1-P Field mustard plastid 42.48 36.72
KRH03578 Soybean nucleus, plastid 23.53 35.29
PGSC0003DMT400079003 Potato plastid 22.88 35.0
VIT_11s0118g00580.t01 Wine grape plastid 21.57 31.73
KRH20233 Soybean plastid 21.57 30.56
Bra028552.1-P Field mustard mitochondrion, plastid 37.25 30.0
Bra036540.1-P Field mustard plastid 35.95 28.8
Bra009829.1-P Field mustard plastid 37.91 28.02
Os08t0167249-00 Rice plastid 32.03 28.0
KRH37829 Soybean plastid 22.88 27.56
Bra006088.1-P Field mustard plastid 37.91 26.73
Bra008991.1-P Field mustard nucleus, plastid 37.25 26.03
Zm00001d024494_P001 Maize plastid 25.49 22.81
KXG24525 Sorghum plastid 26.14 22.47
Protein Annotations
EnsemblPlants:Bra020102.1EnsemblPlants:Bra020102.1-PEnsemblPlantsGene:Bra020102PANTHER:PTHR33132PANTHER:PTHR33132:SF28SEG:seg
UniParc:UPI0002543362UniProt:M4DUA9MapMan:35.2:::
Description
AT5G11090 (E=2e-013) | serine-rich protein-related
Coordinates
chrA02:-:5038293..5038754
Molecular Weight (calculated)
17240.7 Da
IEP (calculated)
11.771
GRAVY (calculated)
-0.753
Length
153 amino acids
Sequence
(BLAST)
001: MAATGRRSNG SSVLYPHSSS HRHQRSASPC NNINLRLKRF SLGNSPPSSS AVRKCSCSPT THPGSFRCGF HRRLESEKIK ALSNKSKSGD SGMYLRKLAL
101: ANSLARIGSV EAERFRKYLT ESIVKPSSLL IRRRFEFRPR LSRFYGMHKD PKD
Best Arabidopsis Sequence Match ( AT5G20370.1 )
(BLAST)
001: MAATGRSSRS VLRPLSSSQR LHNNHHHHHR QRSPSPCNKN LNLRLKFYSP GSIPKPSVVT VSSNHQTKRK CLCSPTTHPG SFRCSFHRRL EHEKSKTLAS
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
Arabidopsis Description
Serine-rich protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3E9A1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.