Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24525 | Sorghum | plastid | 64.91 | 62.36 |
| Os08t0167249-00 | Rice | plastid | 42.11 | 41.14 |
| KRH03578 | Soybean | nucleus, plastid | 20.47 | 34.31 |
| PGSC0003DMT400079003 | Potato | plastid | 19.88 | 34.0 |
| KRH20233 | Soybean | plastid | 20.47 | 32.41 |
| VIT_11s0118g00580.t01 | Wine grape | plastid | 19.3 | 31.73 |
| CDX70925 | Canola | plastid | 26.9 | 31.51 |
| Bra006558.1-P | Field mustard | plastid | 25.73 | 26.35 |
| CDY51848 | Canola | plastid | 25.73 | 26.35 |
| Bra020102.1-P | Field mustard | plastid | 22.81 | 25.49 |
| CDY45090 | Canola | plastid | 22.81 | 25.49 |
| CDY68410 | Canola | plastid | 22.81 | 25.49 |
| AT5G20370.1 | Thale cress | mitochondrion | 22.81 | 22.29 |
| KRH37829 | Soybean | plastid | 15.79 | 21.26 |
| CDY56862 | Canola | plastid | 22.22 | 20.11 |
| CDX92466 | Canola | plastid | 19.88 | 19.21 |
| Bra002297.1-P | Field mustard | plastid | 19.88 | 19.21 |
Protein Annotations
| EnsemblPlants:Zm00001d024494_P001 | EnsemblPlants:Zm00001d024494_T001 | EnsemblPlantsGene:Zm00001d024494 | PANTHER:PTHR33132 | PANTHER:PTHR33132:SF30 | ProteinID:AQK41298.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI00084573E0 | UniProt:A0A1D6IZK9 | MapMan:35.2 | : |
Description
serine-rich protein-related
Coordinates
chr10:-:74141742..74142257
Molecular Weight (calculated)
17316.7 Da
IEP (calculated)
12.886
GRAVY (calculated)
-0.218
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MARATAPSSR PPSAMAAAAA AAAATAASAA ASLVPQRRAT ARGASSRSQP HQHRRATLPV VAPARPKRAS CACSPTTHPG SFRCALHRGG QGPLPASASA
101: ALVSSRLSAP RRASMANPLV RIAAVEGGDH IRRALAALVR PTPSQTRRRA DAFRPTPSRL SAMSSTAAAA P
101: ALVSSRLSAP RRASMANPLV RIAAVEGGDH IRRALAALVR PTPSQTRRRA DAFRPTPSRL SAMSSTAAAA P
001: MVTTSSRTKS NGPVLRSQSP SGRFCGGYSR AVPSSSSSAF ASSTSSSFSS PSSAFFSNHR HHESNHSHHR SASPTRVNLY TAQPMSQSFR YSLDSRSISP
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
Arabidopsis Description
At5g11090 [Source:UniProtKB/TrEMBL;Acc:Q9FY56]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.