Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51848 | Canola | plastid | 85.62 | 74.85 |
| Bra006558.1-P | Field mustard | plastid | 73.29 | 64.07 |
| CDY68410 | Canola | plastid | 47.95 | 45.75 |
| CDY45090 | Canola | plastid | 47.26 | 45.1 |
| PGSC0003DMT400079003 | Potato | plastid | 26.71 | 39.0 |
| AT5G20370.1 | Thale cress | mitochondrion | 46.58 | 38.86 |
| CDX92466 | Canola | plastid | 42.47 | 35.03 |
| KRH03578 | Soybean | nucleus, plastid | 23.97 | 34.31 |
| CDY56862 | Canola | plastid | 42.47 | 32.8 |
| VIT_11s0118g00580.t01 | Wine grape | plastid | 23.29 | 32.69 |
| KRH20233 | Soybean | plastid | 23.97 | 32.41 |
| KRH37829 | Soybean | plastid | 25.34 | 29.13 |
| Os08t0167249-00 | Rice | plastid | 34.25 | 28.57 |
| Zm00001d024494_P001 | Maize | plastid | 31.51 | 26.9 |
| CDX88167 | Canola | plastid | 33.56 | 26.63 |
| CDY19808 | Canola | plastid | 34.93 | 26.42 |
| CDX97080 | Canola | mitochondrion, plastid | 33.56 | 24.75 |
| CDX69786 | Canola | mitochondrion, plastid | 32.88 | 24.74 |
| KXG24525 | Sorghum | plastid | 30.14 | 24.72 |
| CDX80497 | Canola | plastid | 33.56 | 23.79 |
| CDX87091 | Canola | plastid | 31.51 | 23.47 |
| CDX78410 | Canola | mitochondrion, plastid | 34.93 | 22.97 |
| CDX70380 | Canola | mitochondrion, plastid | 34.25 | 22.62 |
| CDY51107 | Canola | plastid | 34.25 | 21.93 |
| CDX85730 | Canola | plastid | 34.25 | 21.46 |
Protein Annotations
| EnsemblPlants:CDX70925 | EnsemblPlantsGene:GSBRNA2T00140835001 | PANTHER:PTHR33132 | PANTHER:PTHR33132:SF28 | ProteinID:CDX70925 | ProteinID:CDX70925.1 |
| SEG:seg | UniParc:UPI0004EDF8B9 | MapMan:35.2 | : | : | : |
Description
BnaC03g10090D
Coordinates
chrLK031791:-:2771633..2772136
Molecular Weight (calculated)
16272.5 Da
IEP (calculated)
11.674
GRAVY (calculated)
-0.678
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATGRSRTS SVLCPLSSPE TFFPGNSPKP STASKCLCSP TTHPGSFRCA FHRRLENEKN RTLNSQAKPN KCGNTTKNSG LSMRKTELLN SLARIASVEA
101: DRFRKSLAAS MVKPSPLHIS RRFDFRPRPS RFYALRKDQD LISSRL
101: DRFRKSLAAS MVKPSPLHIS RRFDFRPRPS RFYALRKDQD LISSRL
001: MAATGRSSRS VLRPLSSSQR LHNNHHHHHR QRSPSPCNKN LNLRLKFYSP GSIPKPSVVT VSSNHQTKRK CLCSPTTHPG SFRCSFHRRL EHEKSKTLAS
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
Arabidopsis Description
Serine-rich protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3E9A1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.