Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70925 | Canola | plastid | 74.85 | 85.62 |
| Bra006558.1-P | Field mustard | plastid | 80.84 | 80.84 |
| CDY68410 | Canola | plastid | 46.11 | 50.33 |
| CDY45090 | Canola | plastid | 45.51 | 49.67 |
| AT5G20370.1 | Thale cress | mitochondrion | 42.52 | 40.57 |
| PGSC0003DMT400079003 | Potato | plastid | 22.16 | 37.0 |
| CDX92466 | Canola | plastid | 37.72 | 35.59 |
| KRH03578 | Soybean | nucleus, plastid | 20.96 | 34.31 |
| CDY56862 | Canola | plastid | 37.13 | 32.8 |
| VIT_11s0118g00580.t01 | Wine grape | plastid | 20.36 | 32.69 |
| KRH20233 | Soybean | plastid | 20.96 | 32.41 |
| KRH37829 | Soybean | plastid | 22.16 | 29.13 |
| Os08t0167249-00 | Rice | plastid | 29.94 | 28.57 |
| CDX88167 | Canola | plastid | 30.54 | 27.72 |
| CDY19808 | Canola | plastid | 30.54 | 26.42 |
| CDX69786 | Canola | mitochondrion, plastid | 29.94 | 25.77 |
| CDX97080 | Canola | mitochondrion, plastid | 30.54 | 25.76 |
| Zm00001d024494_P001 | Maize | plastid | 26.35 | 25.73 |
| CDX80497 | Canola | plastid | 31.14 | 25.24 |
| CDX78410 | Canola | mitochondrion, plastid | 33.53 | 25.23 |
| CDX70380 | Canola | mitochondrion, plastid | 32.34 | 24.43 |
| CDY51107 | Canola | plastid | 32.93 | 24.12 |
| CDX87091 | Canola | plastid | 28.14 | 23.98 |
| KXG24525 | Sorghum | plastid | 25.15 | 23.6 |
| CDX85730 | Canola | plastid | 32.34 | 23.18 |
Protein Annotations
| EnsemblPlants:CDY51848 | EnsemblPlantsGene:GSBRNA2T00004330001 | PANTHER:PTHR33132 | PANTHER:PTHR33132:SF28 | ProteinID:CDY51848 | ProteinID:CDY51848.1 |
| SEG:seg | UniParc:UPI0004EE2B3F | UniProt:A0A078IRZ0 | MapMan:35.2 | : | : |
Description
BnaA03g56150DBnaA03g56150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRZ0]
Coordinates
chrLK033033:+:63643..64146
Molecular Weight (calculated)
18612.5 Da
IEP (calculated)
11.771
GRAVY (calculated)
-0.522
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATGRSRTS SVLCRLSSPE TLLNHHQRPS ASLCNINLRL KSFFPGNTPE TSAASKCLCS PTVHPGSFRC AFHRRLESEK NRTLNSQAKP NKCGNMTKNS
101: GLNMRKTALL NSLVRIASVE ADRVKKSLAA SMVTPSPLHI SRRFDFRPRP SRFYALRKDQ DLISSRL
101: GLNMRKTALL NSLVRIASVE ADRVKKSLAA SMVTPSPLHI SRRFDFRPRP SRFYALRKDQ DLISSRL
001: MAATGRSSRS VLRPLSSSQR LHNNHHHHHR QRSPSPCNKN LNLRLKFYSP GSIPKPSVVT VSSNHQTKRK CLCSPTTHPG SFRCSFHRRL EHEKSKTLAS
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
Arabidopsis Description
Serine-rich protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3E9A1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.