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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • peroxisome 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, peroxisome, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:nucleus
Predotar:plastid
PProwler:plastid
PTS1:peroxisome
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51848 Canola plastid 80.84 80.84
CDX70925 Canola plastid 64.07 73.29
Bra020102.1-P Field mustard plastid 47.9 52.29
AT5G20370.1 Thale cress mitochondrion 44.91 42.86
Bra002297.1-P Field mustard plastid 44.91 42.37
PGSC0003DMT400079003 Potato plastid 23.35 39.0
VIT_11s0118g00580.t01 Wine grape plastid 21.56 34.62
KRH03578 Soybean nucleus, plastid 20.36 33.33
KRH20233 Soybean plastid 21.56 33.33
KRH37829 Soybean plastid 23.35 30.71
Bra028552.1-P Field mustard mitochondrion, plastid 34.73 30.53
Bra036540.1-P Field mustard plastid 32.34 28.27
Os08t0167249-00 Rice plastid 29.34 28.0
Bra009829.1-P Field mustard plastid 32.93 26.57
Bra006088.1-P Field mustard plastid 34.13 26.27
Zm00001d024494_P001 Maize plastid 26.35 25.73
Bra008991.1-P Field mustard nucleus, plastid 33.53 25.57
KXG24525 Sorghum plastid 26.35 24.72
Protein Annotations
EnsemblPlants:Bra006558.1EnsemblPlants:Bra006558.1-PEnsemblPlantsGene:Bra006558PANTHER:PTHR33132PANTHER:PTHR33132:SF28SEG:seg
UniParc:UPI0002540042UniProt:M4CQR7MapMan:35.2:::
Description
AT5G20370 (E=1e-026) | serine-rich protein-related
Coordinates
chrA03:-:4041702..4042205
Molecular Weight (calculated)
18558.4 Da
IEP (calculated)
11.688
GRAVY (calculated)
-0.557
Length
167 amino acids
Sequence
(BLAST)
001: MAATGRSRTS SVLCPLSSPE TLLNHHQRSS ASLCNINLCL KRFFPGNTPK TSAASKCLCS PTTHPGSFRC AFHRRLENEK NRTLNSQAKL NKCGNTTKNS
101: GLNMRKTALL NSLARIGSVE ADRVKKSLAA SMVKPSPLHI SRRFDFRPRP SRFYALRKDQ DLISSRL
Best Arabidopsis Sequence Match ( AT5G20370.1 )
(BLAST)
001: MAATGRSSRS VLRPLSSSQR LHNNHHHHHR QRSPSPCNKN LNLRLKFYSP GSIPKPSVVT VSSNHQTKRK CLCSPTTHPG SFRCSFHRRL EHEKSKTLAS
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
Arabidopsis Description
Serine-rich protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3E9A1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.