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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 2
  • cytosol 1
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78410 Canola mitochondrion, plastid 100.0 97.75
CDX70380 Canola mitochondrion, plastid 94.47 92.76
Bra008991.1-P Field mustard nucleus, plastid 81.57 80.82
Bra028552.1-P Field mustard mitochondrion, plastid 66.82 76.32
Bra009829.1-P Field mustard plastid 67.74 71.01
Bra036540.1-P Field mustard plastid 60.37 68.59
KRH52394 Soybean plastid 62.67 63.26
KRH15826 Soybean plastid 53.0 58.67
Solyc03g117290.1.1 Tomato mitochondrion, plastid 39.63 58.11
KRH05207 Soybean plastid 51.15 54.41
PGSC0003DMT400073335 Potato plastid 45.62 52.38
VIT_09s0002g08540.t01 Wine grape plastid 47.0 50.75
PGSC0003DMT400096763 Potato plastid 46.08 49.75
Solyc06g068330.1.1 Tomato plastid 45.16 49.75
KRH61721 Soybean plastid 59.45 48.31
Bra020102.1-P Field mustard plastid 26.73 37.91
Bra006558.1-P Field mustard plastid 26.27 34.13
GSMUA_Achr1P09980_001 Banana plastid 34.1 33.04
Bra002297.1-P Field mustard plastid 21.2 25.99
Protein Annotations
EnsemblPlants:Bra006088.1EnsemblPlants:Bra006088.1-PEnsemblPlantsGene:Bra006088PANTHER:PTHR33132PANTHER:PTHR33132:SF12SEG:seg
UniParc:UPI000253F902UniProt:M4CPF0MapMan:35.2:::
Description
AT5G11090 (E=1e-075) | serine-rich protein-related
Coordinates
chrA03:+:1936337..1936990
Molecular Weight (calculated)
23636.7 Da
IEP (calculated)
12.196
GRAVY (calculated)
-0.712
Length
217 amino acids
Sequence
(BLAST)
001: MVTTSSRTKS NGPVLRSQSP SGRFCGAYSN PIPSSSSSSA FASSTSSSFS SPSSAFFSNR HDNHHHSHHR SASPTRVNLY KQPQPIAFSL DTRSISPTTT
101: NRSISVAKKP QPSKISSPRR CMCSPTTHPG SFRCSLHKNV ANPHGQGTAS YPTNSLNMRR SAMTNSLVRI GGVEGEWVRR ALTTLIRPSS HHLRRRAAYQ
201: PRPSRLSIMS KAATECN
Best Arabidopsis Sequence Match ( AT5G11090.1 )
(BLAST)
001: MVTTSSRTKS NGPVLRSQSP SGRFCGGYSR AVPSSSSSAF ASSTSSSFSS PSSAFFSNHR HHESNHSHHR SASPTRVNLY TAQPMSQSFR YSLDSRSISP
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
Arabidopsis Description
At5g11090 [Source:UniProtKB/TrEMBL;Acc:Q9FY56]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.