Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24525 | Sorghum | plastid | 42.86 | 42.13 |
| Zm00001d024494_P001 | Maize | plastid | 41.14 | 42.11 |
| KRH03578 | Soybean | nucleus, plastid | 22.29 | 38.24 |
| PGSC0003DMT400079003 | Potato | plastid | 21.71 | 38.0 |
| VIT_11s0118g00580.t01 | Wine grape | plastid | 21.71 | 36.54 |
| CDX70925 | Canola | plastid | 28.57 | 34.25 |
| KRH20233 | Soybean | plastid | 20.57 | 33.33 |
| Bra020102.1-P | Field mustard | plastid | 28.0 | 32.03 |
| CDY45090 | Canola | plastid | 28.0 | 32.03 |
| CDY68410 | Canola | plastid | 27.43 | 31.37 |
| CDY51848 | Canola | plastid | 28.57 | 29.94 |
| Bra006558.1-P | Field mustard | plastid | 28.0 | 29.34 |
| AT5G20370.1 | Thale cress | mitochondrion | 27.43 | 27.43 |
| KRH37829 | Soybean | plastid | 17.14 | 23.62 |
| Bra002297.1-P | Field mustard | plastid | 21.71 | 21.47 |
| CDX92466 | Canola | plastid | 21.71 | 21.47 |
| CDY56862 | Canola | plastid | 22.29 | 20.63 |
Protein Annotations
| EnsemblPlants:Os08t0167249-00 | EnsemblPlantsGene:Os08g0167249 | EntrezGene:107277531 | PANTHER:PTHR33132 | PANTHER:PTHR33132:SF12 | ProteinID:BAT03993.1 |
| RefSeq:XP_015649613.1 | RefSeq:XP_015649614.1 | SEG:seg | UniParc:UPI000393A840 | UniProt:A0A0P0XCC3 | MapMan:35.2 |
Description
Similar to CTV.15. (Os08t0167249-00)
Coordinates
chr8:+:3936725..3937252
Molecular Weight (calculated)
17908.4 Da
IEP (calculated)
12.689
GRAVY (calculated)
-0.353
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSTTPTPA SPSVCRRVRL SSGAGARSPP PPTRQPNGGG LLPSAFRVAL PHATAAVVSS SRGGGGLGAR SRRRECACSP TTHPGSFRCA LHRGAASPSR
101: PSVAAACGGL REDARRSAMA NSLVRIAAVE GGDHVRRAVA ALIRPSSHHQ RRRAAFRPRP SRLSAMSAAA AASSP
101: PSVAAACGGL REDARRSAMA NSLVRIAAVE GGDHVRRAVA ALIRPSSHHQ RRRAAFRPRP SRLSAMSAAA AASSP
001: MVTTSSRTKS NGPVLRSQSP SGRFCGGYSR AVPSSSSSAF ASSTSSSFSS PSSAFFSNHR HHESNHSHHR SASPTRVNLY TAQPMSQSFR YSLDSRSISP
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
Arabidopsis Description
At5g11090 [Source:UniProtKB/TrEMBL;Acc:Q9FY56]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.