Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020102.1-P | Field mustard | plastid | 100.0 | 100.0 |
| CDY68410 | Canola | plastid | 96.73 | 96.73 |
| CDX70925 | Canola | plastid | 45.1 | 47.26 |
| CDY51848 | Canola | plastid | 49.67 | 45.51 |
| AT5G20370.1 | Thale cress | mitochondrion | 47.71 | 41.71 |
| CDX92466 | Canola | plastid | 42.48 | 36.72 |
| KRH03578 | Soybean | nucleus, plastid | 23.53 | 35.29 |
| PGSC0003DMT400079003 | Potato | plastid | 22.88 | 35.0 |
| CDY56862 | Canola | plastid | 41.83 | 33.86 |
| VIT_11s0118g00580.t01 | Wine grape | plastid | 21.57 | 31.73 |
| KRH20233 | Soybean | plastid | 21.57 | 30.56 |
| CDX88167 | Canola | plastid | 35.29 | 29.35 |
| CDY19808 | Canola | plastid | 35.95 | 28.5 |
| CDX80497 | Canola | plastid | 37.91 | 28.16 |
| Os08t0167249-00 | Rice | plastid | 32.03 | 28.0 |
| KRH37829 | Soybean | plastid | 22.88 | 27.56 |
| CDX87091 | Canola | plastid | 34.64 | 27.04 |
| CDX78410 | Canola | mitochondrion, plastid | 37.91 | 26.13 |
| CDX70380 | Canola | mitochondrion, plastid | 36.6 | 25.34 |
| CDX69786 | Canola | mitochondrion, plastid | 32.03 | 25.26 |
| CDX97080 | Canola | mitochondrion, plastid | 32.68 | 25.25 |
| CDY51107 | Canola | plastid | 36.6 | 24.56 |
| CDX85730 | Canola | plastid | 36.6 | 24.03 |
| Zm00001d024494_P001 | Maize | plastid | 25.49 | 22.81 |
| KXG24525 | Sorghum | plastid | 26.14 | 22.47 |
Protein Annotations
| EnsemblPlants:CDY45090 | EnsemblPlantsGene:GSBRNA2T00081369001 | PANTHER:PTHR33132 | PANTHER:PTHR33132:SF28 | ProteinID:CDY45090 | ProteinID:CDY45090.1 |
| SEG:seg | UniParc:UPI0002543362 | UniProt:A0A078I2K7 | MapMan:35.2 | : | : |
Description
BnaA02g04860DBnaA02g04860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2K7]
Coordinates
chrLK032613:+:141803..142264
Molecular Weight (calculated)
17240.7 Da
IEP (calculated)
11.771
GRAVY (calculated)
-0.753
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATGRRSNG SSVLYPHSSS HRHQRSASPC NNINLRLKRF SLGNSPPSSS AVRKCSCSPT THPGSFRCGF HRRLESEKIK ALSNKSKSGD SGMYLRKLAL
101: ANSLARIGSV EAERFRKYLT ESIVKPSSLL IRRRFEFRPR LSRFYGMHKD PKD
101: ANSLARIGSV EAERFRKYLT ESIVKPSSLL IRRRFEFRPR LSRFYGMHKD PKD
001: MAATGRSSRS VLRPLSSSQR LHNNHHHHHR QRSPSPCNKN LNLRLKFYSP GSIPKPSVVT VSSNHQTKRK CLCSPTTHPG SFRCSFHRRL EHEKSKTLAS
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
Arabidopsis Description
Serine-rich protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3E9A1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.