CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20233	Soybean	plastid	64.71	61.11
VIT_11s0118g00580.t01	Wine grape	plastid	44.12	43.27
PGSC0003DMT400079003	Potato	plastid	41.18	42.0
KRH37829	Soybean	plastid	47.06	37.8
KRH09694	Soybean	plastid	40.2	25.47
CDX70925	Canola	plastid	34.31	23.97
Bra020102.1-P	Field mustard	plastid	35.29	23.53
CDY45090	Canola	plastid	35.29	23.53
CDY68410	Canola	plastid	34.31	22.88
KRH12846	Soybean	mitochondrion	42.16	22.63
Os08t0167249-00	Rice	plastid	38.24	22.29
KRH03579	Soybean	mitochondrion	42.16	21.5
KRH37826	Soybean	mitochondrion, plastid	40.2	21.47
CDY51848	Canola	plastid	34.31	20.96
KRH20230	Soybean	mitochondrion	41.18	20.59
AT5G20370.1	Thale cress	mitochondrion	35.29	20.57
Zm00001d024494_P001	Maize	plastid	34.31	20.47
Bra006558.1-P	Field mustard	plastid	33.33	20.36
KRH15826	Soybean	plastid	38.24	19.9
KRH52394	Soybean	plastid	39.22	18.6
KRH05207	Soybean	plastid	36.27	18.14
KXG24525	Sorghum	plastid	31.37	17.98
CDX92466	Canola	plastid	30.39	17.51
Bra002297.1-P	Field mustard	plastid	30.39	17.51
CDY56862	Canola	plastid	30.39	16.4
KRH61721	Soybean	plastid	37.25	14.23

Protein Annotations

EMBL:ACUP02010353	EnsemblPlants:KRH03578	EnsemblPlantsGene:GLYMA_17G106500	PANTHER:PTHR33132	PANTHER:PTHR33132:SF28	ProteinID:KRH03578
ProteinID:KRH03578.1	SEG:seg	UniParc:UPI000233DF41	UniProt:I1MU08	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr17:+:8363586..8364532

Molecular Weight (calculated)

11093.5 Da

IEP (calculated)

11.369

GRAVY (calculated)

-0.611

Length

102 amino acids

Sequence
(BLAST)

001: MASTKCGSRT MKSQPSRTCM CSPTNHPGSF RCSMHKKPPL AAAVPSKWES SPMAAKANSL KATLLQMIKP SSHDHHKRKT FQPKPTRFSL MNNGNAAVVA
101: VN

Best Arabidopsis Sequence Match ( AT5G11090.1 )
(BLAST)

001: MVTTSSRTKS NGPVLRSQSP SGRFCGGYSR AVPSSSSSAF ASSTSSSFSS PSSAFFSNHR HHESNHSHHR SASPTRVNLY TAQPMSQSFR YSLDSRSISP
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN

Arabidopsis Description

At5g11090 [Source:UniProtKB/TrEMBL;Acc:Q9FY56]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.