Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0118g00570.t01 | Wine grape | plastid | 70.05 | 72.14 |
| Solyc12g009880.1.1 | Tomato | plastid | 51.69 | 65.24 |
| PGSC0003DMT400078959 | Potato | mitochondrion | 64.25 | 64.56 |
| Solyc07g007330.1.1 | Tomato | mitochondrion | 63.77 | 64.08 |
| PGSC0003DMT400020263 | Potato | plastid | 50.72 | 64.02 |
| VIT_09s0002g08540.t01 | Wine grape | plastid | 61.35 | 63.18 |
| VIT_11s0118g00580.t01 | Wine grape | plastid | 18.36 | 36.54 |
Protein Annotations
| EntrezGene:100266438 | wikigene:100266438 | MapMan:35.2 | EMBL:AM473054 | ProteinID:CAN72752 | ProteinID:CAN72752.1 |
| ProteinID:CCB46851 | ProteinID:CCB46851.1 | UniProt:F6H3W2 | EMBL:FN595231 | EntrezGene:LOC100266438 | wikigene:LOC100266438 |
| PANTHER:PTHR33132 | PANTHER:PTHR33132:SF12 | TIGR:TC66131 | UniParc:UPI0001982FA2 | ArrayExpress:VIT_04s0008g06250 | EnsemblPlantsGene:VIT_04s0008g06250 |
| EnsemblPlants:VIT_04s0008g06250.t01 | unigene:Vvi.8288 | RefSeq:XP_002285428 | RefSeq:XP_002285428.1 | RefSeq:XP_010648721.1 | SEG:seg |
Description
No Description!
Coordinates
chr4:+:6081403..6082607
Molecular Weight (calculated)
22329.3 Da
IEP (calculated)
12.443
GRAVY (calculated)
-0.466
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSSRTRSS GPVLPVTRAF QRSTSPSGRF CSSPSDSSAA AAAASAFASS TSSFSSASTG FFHRSASPTR VNLYGSTPLA SSVRFSIDRS ISPSRSIAVP
101: RRDQIVRKST PKKRCMCSPT THPGSFRCSL HKNFNNSSHT ISYSSNRLNA RRSAMTNSLV RIGTVEGDLV KRALAALIRP SSHQQRRRAA FQPRPSRLSI
201: MSKAEDL
101: RRDQIVRKST PKKRCMCSPT THPGSFRCSL HKNFNNSSHT ISYSSNRLNA RRSAMTNSLV RIGTVEGDLV KRALAALIRP SSHQQRRRAA FQPRPSRLSI
201: MSKAEDL
001: MVTTSSRTKS NGPVLRSQSP SGRFCGGYSR AVPSSSSSAF ASSTSSSFSS PSSAFFSNHR HHESNHSHHR SASPTRVNLY TAQPMSQSFR YSLDSRSISP
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
Arabidopsis Description
At5g11090 [Source:UniProtKB/TrEMBL;Acc:Q9FY56]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.