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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • cytosol 1
  • mitochondrion 3
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g009880.1.1 Tomato plastid 96.34 96.34
PGSC0003DMT400078959 Potato mitochondrion 69.51 55.34
KRH37826 Soybean mitochondrion, plastid 62.2 53.4
KRH12846 Soybean mitochondrion 59.15 51.05
PGSC0003DMT400073335 Potato plastid 58.54 50.79
VIT_04s0008g06250.t01 Wine grape plastid 64.02 50.72
KRH20230 Soybean mitochondrion 59.76 48.04
PGSC0003DMT400096763 Potato plastid 57.32 46.77
KRH03579 Soybean mitochondrion 56.1 46.0
GSMUA_AchrUn_... Banana mitochondrion, plastid 53.05 45.08
PGSC0003DMT400067139 Potato plastid 54.27 43.63
GSMUA_Achr5P23430_001 Banana plastid 46.95 41.62
PGSC0003DMT400079003 Potato plastid 23.78 39.0
GSMUA_Achr6P02840_001 Banana mitochondrion, plastid 54.27 33.84
Protein Annotations
EnsemblPlants:PGSC0003DMT400020263EnsemblPlantsGene:PGSC0003DMG400007835EntrezGene:102599166PANTHER:PTHR33132PANTHER:PTHR33132:SF12PGSC:PGSC0003DMG400007835
RefSeq:XP_006350113.1SEG:segUniParc:UPI0002949485UniProt:M1AD67MapMan:35.2:
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400007835]
Coordinates
chr12:+:2447669..2448747
Molecular Weight (calculated)
18125.6 Da
IEP (calculated)
12.509
GRAVY (calculated)
-0.763
Length
164 amino acids
Sequence
(BLAST)
001: MAASARRSTG PVLRSLSPAG RFYSSTSRTS SSSASSIRFT LDRETSPSRS ISVMNRQKTM ASSQKKTCMC SPTNHPGSFR CSMHKKMDNR RSSNTSQTAS
101: NSIRLHMRRS AMTNSLVRIG TVEGELVKRA LAALIRPSSH QQRRRSDFQR RPSRLSVISS PGDS
Best Arabidopsis Sequence Match ( AT5G20370.1 )
(BLAST)
001: MAATGRSSRS VLRPLSSSQR LHNNHHHHHR QRSPSPCNKN LNLRLKFYSP GSIPKPSVVT VSSNHQTKRK CLCSPTTHPG SFRCSFHRRL EHEKSKTLAS
101: STVKRNNRGD NTIRVNVGLN LRKLALMNSL AKIGSVEAER FRRSLAANLA KPSSLHSHRR PEFRPRLSRF HEDQD
Arabidopsis Description
Serine-rich protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q3E9A1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.