Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 55.14 | 52.85 |
VIT_11s0118g00570.t01 | Wine grape | plastid | 54.59 | 50.25 |
PGSC0003DMT400020263 | Potato | plastid | 41.62 | 46.95 |
KRH12846 | Soybean | mitochondrion | 48.11 | 46.84 |
Solyc12g009880.1.1 | Tomato | plastid | 41.08 | 46.34 |
KRH37826 | Soybean | mitochondrion, plastid | 47.03 | 45.55 |
KRH20230 | Soybean | mitochondrion | 49.73 | 45.1 |
GSMUA_Achr6P02840_001 | Banana | mitochondrion, plastid | 62.7 | 44.11 |
KRH03579 | Soybean | mitochondrion | 47.57 | 44.0 |
PGSC0003DMT400078959 | Potato | mitochondrion | 48.11 | 43.2 |
Solyc07g007330.1.1 | Tomato | mitochondrion | 47.57 | 42.72 |
GSMUA_Achr1P09980_001 | Banana | plastid | 32.43 | 26.79 |
Protein Annotations
EnsemblPlants:GSMUA_Achr5P23430_001 | EnsemblPlants:GSMUA_Achr5T23430_001 | EnsemblPlantsGene:GSMUA_Achr5G23430_001 | PANTHER:PTHR33132 | PANTHER:PTHR33132:SF12 | SEG:seg |
UniParc:UPI000295BEEB | UniProt:M0T118 | MapMan:35.2 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G23430_001]
Coordinates
chr5:-:25154684..25155241
Molecular Weight (calculated)
19939.6 Da
IEP (calculated)
12.540
GRAVY (calculated)
-0.605
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTPSRRTSG PVLAFRPSIS PRAGSGASFA SSSSSITGRS RNSFSQQRSA QPPAPPLRFS LDRSISYGCS LKRSPAAPAR RTCLCSPSTH PGSFRCSLHK
101: GLDHHNPSHV VAAAAASPSN RLNARRSAMA NSLVRIGAVE GEWVKRALIR PSSHQQRRRT NFQPRPTRLS RMSKAVQPID LESGS
101: GLDHHNPSHV VAAAAASPSN RLNARRSAMA NSLVRIGAVE GEWVKRALIR PSSHQQRRRT NFQPRPTRLS RMSKAVQPID LESGS
001: MVTTSSRTKS NGPVLRSQSP SGRFCGGYSR AVPSSSSSAF ASSTSSSFSS PSSAFFSNHR HHESNHSHHR SASPTRVNLY TAQPMSQSFR YSLDSRSISP
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
Arabidopsis Description
At5g11090 [Source:UniProtKB/TrEMBL;Acc:Q9FY56]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.