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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 4
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400078959 Potato mitochondrion 96.12 96.12
Solyc12g009880.1.1 Tomato plastid 54.37 68.29
Solyc06g065900.2.1 Tomato plastid 30.1 66.67
Solyc03g117290.1.1 Tomato mitochondrion, plastid 46.6 64.86
VIT_04s0008g06250.t01 Wine grape plastid 64.08 63.77
KRH20230 Soybean mitochondrion 60.19 60.78
KRH37826 Soybean mitochondrion, plastid 55.83 60.21
KRH12846 Soybean mitochondrion 55.34 60.0
GSMUA_AchrUn_... Banana mitochondrion, plastid 54.85 58.55
KRH03579 Soybean mitochondrion 56.31 58.0
Solyc06g068330.1.1 Tomato plastid 51.94 54.31
GSMUA_Achr5P23430_001 Banana plastid 42.72 47.57
GSMUA_Achr6P02840_001 Banana mitochondrion, plastid 54.85 42.97
Protein Annotations
EnsemblPlants:Solyc07g007330.1.1EnsemblPlantsGene:Solyc07g007330.1PANTHER:PTHR33132PANTHER:PTHR33132:SF12SEG:segUniParc:UPI000276ABD7
UniProt:K4CBK3MapMan:35.2::::
Description
No Description!
Coordinates
chr7:+:2067659..2068279
Molecular Weight (calculated)
22100.9 Da
IEP (calculated)
12.369
GRAVY (calculated)
-0.599
Length
206 amino acids
Sequence
(BLAST)
001: MAASTRRSSG PVIRSLSPAG KFYSPSQRNS SFSSTSSAFA SSTSGFSTGS HAILHRSTSP NRVNLYSSRS SSPASSVRFS LERSTSPSRS IAAVNRNHVV
101: QNRSQKKSCM CSPTTHPGSF RCSLHKNKSG SGSTGRGTAA TYSPNQLILR RSAMTNSLVR IGTVEGDLVK RALAALIRPS SHQQRRRADF QCRPSRLSVM
201: SKADDS
Best Arabidopsis Sequence Match ( AT5G11090.1 )
(BLAST)
001: MVTTSSRTKS NGPVLRSQSP SGRFCGGYSR AVPSSSSSAF ASSTSSSFSS PSSAFFSNHR HHESNHSHHR SASPTRVNLY TAQPMSQSFR YSLDSRSISP
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
Arabidopsis Description
At5g11090 [Source:UniProtKB/TrEMBL;Acc:Q9FY56]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.