Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400067139 | Potato | plastid | 87.1 | 39.71 |
| Solyc03g117290.1.1 | Tomato | mitochondrion, plastid | 62.37 | 39.19 |
| Solyc12g009880.1.1 | Tomato | plastid | 63.44 | 35.98 |
| Solyc07g007330.1.1 | Tomato | mitochondrion | 66.67 | 30.1 |
| Solyc06g068330.1.1 | Tomato | plastid | 61.29 | 28.93 |
Protein Annotations
| EnsemblPlants:Solyc06g065900.2.1 | EnsemblPlantsGene:Solyc06g065900.2 | PANTHER:PTHR33132 | PANTHER:PTHR33132:SF12 | UniParc:UPI0002765B8C | UniProt:K4C7L8 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:41299294..41300413
Molecular Weight (calculated)
10512.8 Da
IEP (calculated)
12.180
GRAVY (calculated)
-0.610
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MAVSQRDQVV RKQIPKRTCL CSPTTHPGSF RCSMHKNVKN TPSISYSPSR LNARRSAMTN SLVRICSVEG DLVKRALAAL IRPSSHHQRR RGW
001: MVTTSSRTKS NGPVLRSQSP SGRFCGGYSR AVPSSSSSAF ASSTSSSFSS PSSAFFSNHR HHESNHSHHR SASPTRVNLY TAQPMSQSFR YSLDSRSISP
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
101: TNKSISVSKN QPPSHNHKIS RRCMCSPTTH PGSFRCSLHK NVANPHGQGT ASYTTNGLNM RRSAMTNSLV RIGGVEGEWV RRALTTLIRP SSHHLKRRAA
201: YQPRPSRLSI MAKADEN
Arabidopsis Description
At5g11090 [Source:UniProtKB/TrEMBL;Acc:Q9FY56]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.