Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G215200.1 | Wheat | mitochondrion | 63.47 | 99.07 |
| TraesCS4A01G089100.1 | Wheat | mitochondrion | 63.47 | 99.07 |
| TraesCS4D01G215700.1 | Wheat | mitochondrion | 59.88 | 95.24 |
| Os03t0263700-01 | Rice | cytosol | 58.68 | 91.59 |
| Zm00001d028531_P001 | Maize | plasma membrane | 53.29 | 80.91 |
| EER95136 | Sorghum | mitochondrion | 53.29 | 78.07 |
| Zm00001d047857_P001 | Maize | cytosol, extracellular, golgi, mitochondrion | 50.3 | 75.68 |
| GSMUA_Achr6P10030_001 | Banana | nucleus | 28.74 | 68.57 |
| KRH18786 | Soybean | mitochondrion | 44.31 | 67.89 |
| PGSC0003DMT400036564 | Potato | mitochondrion | 39.52 | 67.35 |
| KRH16578 | Soybean | mitochondrion | 43.71 | 66.97 |
| Solyc11g013100.1.1 | Tomato | nucleus | 25.15 | 66.67 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plastid | 45.51 | 65.52 |
| CDY34007 | Canola | mitochondrion | 41.92 | 62.5 |
| Bra000643.1-P | Field mustard | mitochondrion | 41.92 | 62.5 |
| VIT_18s0001g03450.t01 | Wine grape | mitochondrion | 39.52 | 59.46 |
| AT4G08230.1 | Thale cress | cytosol | 40.12 | 59.29 |
| CDX83140 | Canola | mitochondrion | 42.52 | 49.31 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G061190.1 | EnsemblPlantsGene:HORVU4Hr1G061190 | InterPro:Se_SelK/SelG | PANTHER:PTHR16875 | PFAM:PF10961 | SEG:seg |
| UniParc:UPI000B476B00 | UniProt:A0A287PA80 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:514392243..514394945
Molecular Weight (calculated)
17545.9 Da
IEP (calculated)
10.410
GRAVY (calculated)
-0.353
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: SRAHWSGQVR SSHAEGRGRF TNPLLTSTLP PPYFFPLSQN LVLSFIGEGG KGDPFSASAT MAYVERGVVK GKRTIWRLSI IPDFFKAVVN FIRMFFLTMF
101: SIEKTDSYKK GYGSGKKWDG GPGGGGPGGG PYGGGGGGGG GPRGPRTLSD LRSNDQSSLP ACGSCCG
101: SIEKTDSYKK GYGSGKKWDG GPGGGGPGGG PYGGGGGGGG GPRGPRTLSD LRSNDQSSLP ACGSCCG
001: MAYVEGGVVK AKRPIWRLRT IKDFFLSIIN LIQVFFVTMF SMEKSDAYRK GSKPNKKWGG GMGGGGGGGG GSGGGGGGRG GGPPRGGLDN VRGLNDIRGA
101: DHNSLPACGS CCG
101: DHNSLPACGS CCG
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q8VY68]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.