Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G215200.1 | Wheat | mitochondrion | 92.52 | 92.52 |
| TraesCS4A01G089100.1 | Wheat | mitochondrion | 92.52 | 92.52 |
| TraesCS4D01G215700.1 | Wheat | mitochondrion | 87.85 | 89.52 |
| Zm00001d028531_P001 | Maize | plasma membrane | 85.05 | 82.73 |
| EER95136 | Sorghum | mitochondrion | 85.05 | 79.82 |
| Zm00001d047857_P001 | Maize | cytosol, extracellular, golgi, mitochondrion | 80.37 | 77.48 |
| KRH18786 | Soybean | mitochondrion | 69.16 | 67.89 |
| KRH16578 | Soybean | mitochondrion | 68.22 | 66.97 |
| CDY34007 | Canola | mitochondrion | 68.22 | 65.18 |
| Bra000643.1-P | Field mustard | mitochondrion | 68.22 | 65.18 |
| PGSC0003DMT400036564 | Potato | mitochondrion | 58.88 | 64.29 |
| Solyc11g013100.1.1 | Tomato | nucleus | 37.38 | 63.49 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plastid | 68.22 | 62.93 |
| GSMUA_Achr6P10030_001 | Banana | nucleus | 41.12 | 62.86 |
| AT4G08230.1 | Thale cress | cytosol | 65.42 | 61.95 |
| HORVU4Hr1G061190.1 | Barley | mitochondrion | 91.59 | 58.68 |
| VIT_18s0001g03450.t01 | Wine grape | mitochondrion | 60.75 | 58.56 |
| CDX83140 | Canola | mitochondrion | 68.22 | 50.69 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4332336 | ProteinID:ABF95113.1 | ProteinID:ABF95114.1 | EMBL:AK071748 | ProteinID:BAF11550.1 |
| ProteinID:BAS83383.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006816 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0032469 | EnsemblPlantsGene:Os03g0263700 | EnsemblPlants:Os03t0263700-01 |
| PFAM:PD353114 | PFAM:PF10961 | PANTHER:PTHR16875 | UniProt:Q10NP4 | InterPro:Se_SelK/SelG | TMHMM:TMhelix |
| UniParc:UPI0000DB493B | RefSeq:XP_015628134.1 | SEG:seg | : | : | : |
Description
Similar to glycine-rich protein. (Os03t0263700-01)
Coordinates
chr3:+:8668092..8671028
Molecular Weight (calculated)
11390.7 Da
IEP (calculated)
10.322
GRAVY (calculated)
-0.395
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYVERGVVK DKRTIWRLSI ISDFFRAIVN FIRMFFLTMF SIEKTDSYRK GYGSGKKWDG GPGGGGPGGG PYGGGRGGGG GLRGPRTLSD IRSNDQNSLP
101: ACGSCCG
101: ACGSCCG
001: MAYVEGGVVK AKRPIWRLRT IKDFFLSIIN LIQVFFVTMF SMEKSDAYRK GSKPNKKWGG GMGGGGGGGG GSGGGGGGRG GGPPRGGLDN VRGLNDIRGA
101: DHNSLPACGS CCG
101: DHNSLPACGS CCG
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q8VY68]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.