Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- extracellular 2
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G215200.1 | Wheat | mitochondrion | 96.19 | 94.39 |
| TraesCS4A01G089100.1 | Wheat | mitochondrion | 96.19 | 94.39 |
| Os03t0263700-01 | Rice | cytosol | 89.52 | 87.85 |
| Zm00001d028531_P001 | Maize | plasma membrane | 80.95 | 77.27 |
| EER95136 | Sorghum | mitochondrion | 80.95 | 74.56 |
| Zm00001d047857_P001 | Maize | cytosol, extracellular, golgi, mitochondrion | 76.19 | 72.07 |
| GSMUA_Achr6P10030_001 | Banana | nucleus | 45.71 | 68.57 |
| Solyc11g013100.1.1 | Tomato | nucleus | 40.0 | 66.67 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plastid | 73.33 | 66.38 |
| KRH18786 | Soybean | mitochondrion | 66.67 | 64.22 |
| KRH16578 | Soybean | mitochondrion | 65.71 | 63.3 |
| PGSC0003DMT400036564 | Potato | mitochondrion | 59.05 | 63.27 |
| HORVU4Hr1G061190.1 | Barley | mitochondrion | 95.24 | 59.88 |
| CDY34007 | Canola | mitochondrion | 63.81 | 59.82 |
| Bra000643.1-P | Field mustard | mitochondrion | 63.81 | 59.82 |
| AT4G08230.1 | Thale cress | cytosol | 60.95 | 56.64 |
| VIT_18s0001g03450.t01 | Wine grape | mitochondrion | 59.05 | 55.86 |
| CDX83140 | Canola | mitochondrion | 63.81 | 46.53 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G215700.1 | EnsemblPlantsGene:TraesCS4D01G215700 | InterPro:Se_SelK/SelG | PANTHER:PTHR16875 | PFAM:PF10961 | SEG:seg |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:369331915..369332433
Molecular Weight (calculated)
10915.2 Da
IEP (calculated)
10.239
GRAVY (calculated)
-0.271
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLPGVVKGK RTIWRLSIIL DFFKAIVNFI RMFFLTMFSI EKTDSYKKGY GSGKKWDGGP GGGGPGGGPY GGGGGGGGGP RGPRTLSDLR SNDQSSLPAC
101: GSCCG
101: GSCCG
001: MAYVEGGVVK AKRPIWRLRT IKDFFLSIIN LIQVFFVTMF SMEKSDAYRK GSKPNKKWGG GMGGGGGGGG GSGGGGGGRG GGPPRGGLDN VRGLNDIRGA
101: DHNSLPACGS CCG
101: DHNSLPACGS CCG
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q8VY68]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.