Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g013100.1.1 | Tomato | nucleus | 60.0 | 66.67 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, plastid | 87.14 | 52.59 |
| TraesCS4D01G215700.1 | Wheat | mitochondrion | 68.57 | 45.71 |
| TraesCS4B01G215200.1 | Wheat | mitochondrion | 68.57 | 44.86 |
| TraesCS4A01G089100.1 | Wheat | mitochondrion | 68.57 | 44.86 |
| PGSC0003DMT400036564 | Potato | mitochondrion | 58.57 | 41.84 |
| Os03t0263700-01 | Rice | cytosol | 62.86 | 41.12 |
| EER95136 | Sorghum | mitochondrion | 65.71 | 40.35 |
| Zm00001d028531_P001 | Maize | plasma membrane | 62.86 | 40.0 |
| Zm00001d047857_P001 | Maize | cytosol, extracellular, golgi, mitochondrion | 61.43 | 38.74 |
| KRH18786 | Soybean | mitochondrion | 60.0 | 38.53 |
| VIT_18s0001g03450.t01 | Wine grape | mitochondrion | 60.0 | 37.84 |
| CDY34007 | Canola | mitochondrion | 60.0 | 37.5 |
| Bra000643.1-P | Field mustard | mitochondrion | 60.0 | 37.5 |
| KRH16578 | Soybean | mitochondrion | 57.14 | 36.7 |
| AT4G08230.1 | Thale cress | cytosol | 57.14 | 35.4 |
| CDX83140 | Canola | mitochondrion | 60.0 | 29.17 |
| HORVU4Hr1G061190.1 | Barley | mitochondrion | 68.57 | 28.74 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P10030_001 | EnsemblPlants:GSMUA_Achr6T10030_001 | EnsemblPlantsGene:GSMUA_Achr6G10030_001 | SEG:seg | UniParc:UPI0002964E1B | UniProt:M0T5Q2 |
| MapMan:35.2 | : | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G10030_001]
Coordinates
chr6:+:6714224..6716295
Molecular Weight (calculated)
6914.9 Da
IEP (calculated)
8.497
GRAVY (calculated)
-0.930
Length
70 amino acids
Sequence
(BLAST)
(BLAST)
1: MFSMEKSDQY QKGLGSSKKW DGGHGGGPGG GSGGGPYGGG PGGRRGPYTL SDLRSNDHSS HPACGLCCGG
001: MAYVEGGVVK AKRPIWRLRT IKDFFLSIIN LIQVFFVTMF SMEKSDAYRK GSKPNKKWGG GMGGGGGGGG GSGGGGGGRG GGPPRGGLDN VRGLNDIRGA
101: DHNSLPACGS CCG
101: DHNSLPACGS CCG
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q8VY68]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.