Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 3
- endoplasmic reticulum 2
- plasma membrane 2
- extracellular 3
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P10030_001 | Banana | nucleus | 52.59 | 87.14 |
| TraesCS4D01G215700.1 | Wheat | mitochondrion | 66.38 | 73.33 |
| TraesCS4B01G215200.1 | Wheat | mitochondrion | 66.38 | 71.96 |
| TraesCS4A01G089100.1 | Wheat | mitochondrion | 66.38 | 71.96 |
| Solyc11g013100.1.1 | Tomato | nucleus | 38.79 | 71.43 |
| Os03t0263700-01 | Rice | cytosol | 62.93 | 68.22 |
| Zm00001d028531_P001 | Maize | plasma membrane | 62.07 | 65.45 |
| PGSC0003DMT400036564 | Potato | mitochondrion | 55.17 | 65.31 |
| KRH18786 | Soybean | mitochondrion | 61.21 | 65.14 |
| EER95136 | Sorghum | mitochondrion | 63.79 | 64.91 |
| Zm00001d047857_P001 | Maize | cytosol, extracellular, golgi, mitochondrion | 62.07 | 64.86 |
| KRH16578 | Soybean | mitochondrion | 58.62 | 62.39 |
| VIT_18s0001g03450.t01 | Wine grape | mitochondrion | 57.76 | 60.36 |
| CDY34007 | Canola | mitochondrion | 56.03 | 58.04 |
| Bra000643.1-P | Field mustard | mitochondrion | 56.03 | 58.04 |
| AT4G08230.1 | Thale cress | cytosol | 53.45 | 54.87 |
| CDX83140 | Canola | mitochondrion | 56.9 | 45.83 |
| HORVU4Hr1G061190.1 | Barley | mitochondrion | 65.52 | 45.51 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P19440_001 | EnsemblPlants:GSMUA_Achr10T19440_001 | EnsemblPlantsGene:GSMUA_Achr10G19440_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Se_SelK/SelG | PANTHER:PTHR16875 | PFAM:PD353114 | PFAM:PF10961 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002961C7A | UniProt:M0RJL9 | MapMan:35.2 | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G19440_001]
Coordinates
chr10:-:25823018..25824102
Molecular Weight (calculated)
12062.2 Da
IEP (calculated)
9.408
GRAVY (calculated)
-0.283
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFCTQASFF VGSVVQSKRT IWRLSIISDF FWAIVNSIGL FFITMFSMEK SDQYKKGSGS SKKWDGGPGG GGPGGSSGSG PYGGGPGGRR GPRTLSDLRS
101: NDHSSFPACG SCCGGG
101: NDHSSFPACG SCCGGG
001: MAYVEGGVVK AKRPIWRLRT IKDFFLSIIN LIQVFFVTMF SMEKSDAYRK GSKPNKKWGG GMGGGGGGGG GSGGGGGGRG GGPPRGGLDN VRGLNDIRGA
101: DHNSLPACGS CCG
101: DHNSLPACGS CCG
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q8VY68]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.