Factsheet for Zm00001d047857_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, extracellular, cytosol

Predictor Summary:

golgi 1
mitochondrion 2
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, golgi, mitochondrion
Any Predictor:	cytosol, golgi, mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028531_P001	Maize	plasma membrane	88.29	89.09
Os03t0263700-01	Rice	cytosol	77.48	80.37
TraesCS4B01G215200.1	Wheat	mitochondrion	76.58	79.44
TraesCS4A01G089100.1	Wheat	mitochondrion	76.58	79.44
TraesCS4D01G215700.1	Wheat	mitochondrion	72.07	76.19
KRH18786	Soybean	mitochondrion	61.26	62.39
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, plastid	64.86	62.07
KRH16578	Soybean	mitochondrion	60.36	61.47
GSMUA_Achr6P10030_001	Banana	nucleus	38.74	61.43
PGSC0003DMT400036564	Potato	mitochondrion	54.05	61.22
CDY34007	Canola	mitochondrion	58.56	58.04
Bra000643.1-P	Field mustard	mitochondrion	58.56	58.04
AT4G08230.1	Thale cress	cytosol	56.76	55.75
Solyc11g013100.1.1	Tomato	nucleus	31.53	55.56
VIT_18s0001g03450.t01	Wine grape	mitochondrion	54.95	54.95
HORVU4Hr1G061190.1	Barley	mitochondrion	75.68	50.3
CDX83140	Canola	mitochondrion	58.56	45.14

Protein Annotations

EMBL:EU959860	EnsemblPlants:Zm00001d047857_P001	EnsemblPlants:Zm00001d047857_T001	EnsemblPlantsGene:Zm00001d047857	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Se_SelK/SelG	PANTHER:PTHR16875	PFAM:PD353114	PFAM:PF10961	ProteinID:AQL07826.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000182CF9B	UniProt:B6T4E5	MapMan:35.2	:

Description

glycine-rich protein

Coordinates

chr9:-:143574683..143579470

Molecular Weight (calculated)

11518.6 Da

IEP (calculated)

9.658

GRAVY (calculated)

-0.295

Length

111 amino acids

Sequence
(BLAST)

001: MAYVERGVVK DKRTIWRLSI ISDFFWAIVS FIRIFFDTLF SLDKTDNFKK GYGAGKKWDG GPGGGGRGPY GGGGGGGFGG GGGGGSRGPR TLSDIQSNDH
101: SSLPACGSCC G

Best Arabidopsis Sequence Match ( AT4G08230.1 )
(BLAST)

001: MAYVEGGVVK AKRPIWRLRT IKDFFLSIIN LIQVFFVTMF SMEKSDAYRK GSKPNKKWGG GMGGGGGGGG GSGGGGGGRG GGPPRGGLDN VRGLNDIRGA
101: DHNSLPACGS CCG

Arabidopsis Description

Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q8VY68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.