Factsheet for Bra030451.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra026048.1-P
Bra026720.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51190.1	Bra026048.1-P	AT1G16490.1	21245844
AT1G51190.1	Bra026720.1-P	AT1G16490.1	21245844

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29623	Canola	nucleus	99.11	99.47
CDY35571	Canola	nucleus	96.1	96.27
AT1G51190.1	Thale cress	nucleus	90.96	90.32
Bra018899.1-P	Field mustard	nucleus	88.83	89.62
Bra031234.1-P	Field mustard	nucleus	75.71	76.66
Bra023921.1-P	Field mustard	nucleus	61.52	74.3
VIT_06s0004g01800.t01	Wine grape	nucleus	68.26	70.0
KRH24688	Soybean	nucleus	67.55	68.9
Solyc11g061750.1.1	Tomato	nucleus	66.84	68.8
PGSC0003DMT400035354	Potato	nucleus	66.84	68.42
KRH29690	Soybean	nucleus	67.02	63.21
Bra024394.1-P	Field mustard	nucleus	37.23	46.77
Bra008040.1-P	Field mustard	nucleus	33.51	42.95
Bra013978.1-P	Field mustard	nucleus	41.31	40.24
GSMUA_Achr2P05880_001	Banana	nucleus	40.43	39.86
Bra035137.1-P	Field mustard	nucleus	21.63	39.61
Bra006065.1-P	Field mustard	nucleus	38.48	39.03
Bra026082.1-P	Field mustard	nucleus	22.7	38.79
Os02t0614300-01	Rice	mitochondrion, nucleus	21.81	38.32
Bra028584.1-P	Field mustard	nucleus	38.12	38.19
Bra020444.1-P	Field mustard	nucleus	37.23	37.57
Bra009026.1-P	Field mustard	nucleus	37.77	37.11
HORVU6Hr1G057060.3	Barley	nucleus	42.38	36.66
Bra023617.1-P	Field mustard	nucleus	34.75	36.57
TraesCS6A01G229500.1	Wheat	nucleus	42.2	36.12
TraesCS6D01G205300.1	Wheat	nucleus	42.2	36.01
Bra011782.1-P	Field mustard	nucleus	34.75	35.96
TraesCS6B01G252000.1	Wheat	nucleus	42.2	35.95
Bra017852.1-P	Field mustard	nucleus	34.75	35.25
Zm00001d017207_P001	Maize	nucleus	42.2	35.21
TraesCS2D01G357600.1	Wheat	nucleus	40.6	34.96
Os04t0504500-01	Rice	nucleus	40.78	34.95
TraesCS2B01G378100.1	Wheat	nucleus	40.78	34.85
HORVU2Hr1G087310.1	Barley	nucleus	40.6	34.75
KXG30667	Sorghum	nucleus	42.2	34.49
Bra010610.1-P	Field mustard	nucleus	32.98	33.63
Bra007066.1-P	Field mustard	plastid	23.23	31.8
Bra003178.1-P	Field mustard	plastid	23.05	31.48

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra030451
EnsemblPlants:Bra030451.1	EnsemblPlants:Bra030451.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4ENT1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF22	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0002547AD4	SEG:seg	:	:	:	:

Description

AT1G51190 (E=1e-251) PLT2 | PLT2 (PLETHORA 2); transcription factor

Coordinates

chrA05:-:11427986..11430795

Molecular Weight (calculated)

62077.4 Da

IEP (calculated)

6.393

GRAVY (calculated)

-0.708

Length

564 amino acids

Sequence
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP LIHSSQTSQF NLGLVNDNMD NPFENQEWNM INPHGGGGEG GEIPKVADFL GVSKSDNHQA DLVPYNDIHQ TNDSDYYFQT
101: NSLLPTVVTC ASNTPNNYEL QESAHNLQSL TLSMGSAGDA AAAAAAVKAS PGETSADNSS STTNISGGTT VEAAPRRPVE TFGQRTSIYR GVTRHRWTGR
201: YEAHLWDNSC RREGQSRKGR QVYLGGYDKE EKAARAYDLA ALKYWGPSTT TNFPITNYEK EVEEMKNMTR QEFVAAIRRK SSGFSRGASM YRGVTRHHQH
301: GRWQARIGRV AGNKDLYLGT FTTEEEAAEA YDIAAIKFRG LNAVTNFEIN RYDVKAILES NTLPIGGGAA KRLKEAQALE SSRKREEMIA LSSNFHQYGA
401: ASGSSSGLQL QPYPLSIQQP FEHLHHQPLL TLQNNNDVSQ YNTNVHDSYS YIQTQLHLHQ QQTNNYLQSS SHNSQLYNAY LQSNPGLLHG FVSDNNNTPA
501: VYGNNGIGIG STSTVGTSAE EEFPTVKVDY DMPPLGGATG CERWTNGEHG QGSNPGGVFT MWNE

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.