Factsheet for Bra035137.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88560	Canola	nucleus	98.05	97.73
CDX87360	Canola	nucleus	98.7	96.82
AT1G79700.2	Thale cress	nucleus	79.87	78.59
Bra026082.1-P	Field mustard	nucleus	74.35	69.39
KRH47304	Soybean	nucleus	62.99	66.9
KRH44591	Soybean	plastid	62.99	61.98
Solyc06g068570.2.1	Tomato	nucleus	60.71	59.37
VIT_09s0018g01650.t01	Wine grape	plastid	63.64	54.29
Solyc03g117720.2.1	Tomato	nucleus, plastid	63.64	52.83
GSMUA_Achr5P04670_001	Banana	nucleus	61.04	52.22
Os09t0423800-01	Rice	nucleus	59.09	49.86
TraesCS6B01G153800.1	Wheat	nucleus	52.6	48.07
TraesCS5D01G229400.1	Wheat	nucleus	61.36	47.73
TraesCS5B01G220400.2	Wheat	nucleus	61.36	47.61
TraesCS5A01G221600.1	Wheat	nucleus	60.71	47.22
OQU89519	Sorghum	plastid	58.44	45.57
Os08t0442400-01	Rice	nucleus	61.04	44.87
TraesCS6A01G125700.1	Wheat	nucleus	49.35	43.55
Zm00001d020540_P002	Maize	plastid	58.12	43.55
Zm00001d032144_P001	Maize	nucleus	49.68	37.78
Bra007066.1-P	Field mustard	plastid	49.68	37.14
Bra003178.1-P	Field mustard	plastid	49.35	36.8
OQU80549	Sorghum	nucleus	51.95	36.36
Bra008040.1-P	Field mustard	nucleus	37.66	26.36
Bra024394.1-P	Field mustard	nucleus	38.31	26.28
Bra013978.1-P	Field mustard	nucleus	43.51	23.14
Bra020444.1-P	Field mustard	nucleus	41.88	23.08
Bra011782.1-P	Field mustard	nucleus	40.26	22.75
Bra017852.1-P	Field mustard	nucleus	40.26	22.3
Bra006065.1-P	Field mustard	nucleus	39.94	22.12
Bra018899.1-P	Field mustard	nucleus	39.94	22.0
Bra028584.1-P	Field mustard	nucleus	39.94	21.85
Bra030451.1-P	Field mustard	nucleus	39.61	21.63
Bra009026.1-P	Field mustard	nucleus	40.26	21.6
Bra031234.1-P	Field mustard	nucleus	38.64	21.36
Bra010610.1-P	Field mustard	nucleus	36.69	20.43
Bra023617.1-P	Field mustard	nucleus	34.09	19.59
Bra023921.1-P	Field mustard	nucleus	18.83	12.42

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra035137
EnsemblPlants:Bra035137.1	EnsemblPlants:Bra035137.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0000976	GO:GO:0000981	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006357
GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	GO:GO:0045723	GO:GO:1901959	GO:GO:1904278	InterPro:IPR001471	InterPro:IPR036955
UniProt:M4F240	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF20
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002541DBD	SEG:seg	:	:

Description

AT1G79700 (E=1e-124) | ovule development protein, putative

Coordinates

chrA07:-:22325696..22328639

Molecular Weight (calculated)

35069.5 Da

IEP (calculated)

8.667

GRAVY (calculated)

-0.921

Length

308 amino acids

Sequence
(BLAST)

001: MAKLSQRNKK IIEDQTIDKT ATASASPVVF KCKRKRKSPP QNAPPQRSSS HRGVTRHRWT GRYEAHLWDK NSWNETQTKK GRQVYLGAYD EEEAAARAYD
101: LAALKYWGRD TLLNFPLSTY EEDVKEMESH SKEEYIGSLR RKSSGFSRGV SKYRGVARHH HNGRWEARIG RVFGNKYLYL GTYATQEEAA RAYDIAAIEY
201: RGLNAVTNFD VSRYLDLPAT KKPNAAASPE SPNDQTSSDD NNFTKTEVIT EPSTPPEAIQ SRRSFPDDIQ TYFECQDSGK LATEEDVIFG GFNSFISPGL
301: CNEFDYWS

Best Arabidopsis Sequence Match ( AT1G79700.2 )
(BLAST)

001: MAKVSGRSKK TIVDDEISDK TASASESASI ALTSKRKRKS PPRNAPLQRS SPYRGVTRHR WTGRYEAHLW DKNSWNDTQT KKGRQVYLGA YDEEEAAARA
101: YDLAALKYWG RDTLLNFPLP SYDEDVKEME GQSKEEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE AAIAYDIAAI
201: EYRGLNAVTN FDVSRYLNPN AAADKADSDS KPIRSPSREP ESSDDNKSPK SEEVIEPSTS PEVIPTRRSF PDDIQTYFGC QDSGKLATEE DVIFDCFNSY
301: INPGFYNEFD YGP

Arabidopsis Description

Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MQS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.