Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G229400.1 | Wheat | nucleus | 97.73 | 97.98 |
| TraesCS5A01G221600.1 | Wheat | nucleus | 95.97 | 96.21 |
| Os09t0423800-01 | Rice | nucleus | 79.09 | 86.03 |
| OQU89519 | Sorghum | plastid | 73.05 | 73.42 |
| Zm00001d020540_P002 | Maize | plastid | 75.31 | 72.75 |
| KRH47304 | Soybean | nucleus | 49.62 | 67.93 |
| CDY33356 | Canola | nucleus | 32.75 | 67.71 |
| VIT_09s0018g01650.t01 | Wine grape | plastid | 58.44 | 64.27 |
| KRH44591 | Soybean | plastid | 50.13 | 63.58 |
| KRH63091 | Soybean | plastid | 55.42 | 63.4 |
| VIT_11s0037g00870.t01 | Wine grape | plastid | 54.91 | 62.82 |
| KRH55024 | Soybean | plastid | 55.16 | 62.39 |
| CDX88560 | Canola | nucleus | 48.11 | 61.81 |
| Bra035137.1-P | Field mustard | nucleus | 47.61 | 61.36 |
| AT1G79700.2 | Thale cress | nucleus | 47.61 | 60.38 |
| KRH72352 | Soybean | nucleus | 54.91 | 59.73 |
| CDX87360 | Canola | nucleus | 46.6 | 58.92 |
| KRH02994 | Soybean | nucleus | 54.16 | 58.11 |
| Solyc03g117720.2.1 | Tomato | nucleus, plastid | 54.16 | 57.95 |
| CDY35066 | Canola | nucleus | 48.11 | 57.88 |
| AT1G16060.1 | Thale cress | nucleus | 50.13 | 57.68 |
| Bra026082.1-P | Field mustard | nucleus | 47.86 | 57.58 |
| Solyc12g010490.1.1 | Tomato | plastid | 52.64 | 57.42 |
| TraesCS6B01G153800.1 | Wheat | nucleus | 48.61 | 57.27 |
| GSMUA_Achr5P04670_001 | Banana | nucleus | 51.39 | 56.67 |
| Solyc06g068570.2.1 | Tomato | nucleus | 44.84 | 56.51 |
| PGSC0003DMT400087745 | Potato | nucleus | 41.06 | 55.44 |
| TraesCS4B01G136400.1 | Wheat | plastid | 31.49 | 37.88 |
| TraesCS4B01G180600.1 | Wheat | nucleus | 31.74 | 33.6 |
| TraesCS3B01G368400.1 | Wheat | plastid | 32.24 | 33.25 |
| TraesCS7B01G401400.1 | Wheat | nucleus | 34.51 | 29.34 |
| TraesCS2B01G534000.1 | Wheat | nucleus | 31.74 | 26.09 |
| TraesCS4B01G292900.1 | Wheat | nucleus | 33.75 | 25.38 |
| TraesCS2B01G268100.2 | Wheat | nucleus | 35.26 | 23.33 |
| TraesCS5B01G410200.1 | Wheat | nucleus | 35.01 | 22.13 |
| TraesCS4B01G235900.2 | Wheat | nucleus | 34.01 | 21.36 |
| TraesCS6B01G252000.1 | Wheat | nucleus | 34.51 | 20.69 |
| TraesCS2B01G378100.1 | Wheat | nucleus | 33.75 | 20.3 |
| TraesCS3B01G427300.1 | Wheat | nucleus, plastid | 35.52 | 18.83 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 |
| PANTHER:PTHR32467:SF20 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS5B01G220400 | EnsemblPlants:TraesCS5B01G220400.2 | TIGR:cd00018 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:394743751..394747764
Molecular Weight (calculated)
43183.2 Da
IEP (calculated)
6.926
GRAVY (calculated)
-0.512
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKPRKNSAA AAAAAAANSN AIASAAADAG ADVRAKPKKR TRKSVPRESP SQRSSVHRGV TRHRWTGRFE AHLWDKNSWN ESQNKKGKQV YLGAYDEEEA
101: AARAYDLAAL KYWGPDTILN FPLSIYEEEL KEMEGQSREE YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA TQEEAAMAYD
201: MAAIEYRGLN AVTNFDLSRY IKWLRPGAAD VAGAAGRSAH PMLASLAAQE LPAIDLDAMA FQHDLHQQGM EDGMTAEAAA AAAEAQFPLL PARAATLGHT
301: PTTSALSLLL QSPKFKEMIE RTSAAESSTT TSSSSMSTPP PPQATRDDGA SPQCSFPEDI QTFFGSDDGV AYTDVDGLFF GDLSAYASPA FHFELDL
101: AARAYDLAAL KYWGPDTILN FPLSIYEEEL KEMEGQSREE YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA TQEEAAMAYD
201: MAAIEYRGLN AVTNFDLSRY IKWLRPGAAD VAGAAGRSAH PMLASLAAQE LPAIDLDAMA FQHDLHQQGM EDGMTAEAAA AAAEAQFPLL PARAATLGHT
301: PTTSALSLLL QSPKFKEMIE RTSAAESSTT TSSSSMSTPP PPQATRDDGA SPQCSFPEDI QTFFGSDDGV AYTDVDGLFF GDLSAYASPA FHFELDL
001: MFIAVEVSPV MEDITRQSKK TSVENETGDD QSATSVVLKA KRKRRSQPRD APPQRSSVHR GVTRHRWTGR YEAHLWDKNS WNETQTKKGR QVYLGAYDEE
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC
Arabidopsis Description
ADAPAP2-like ethylene-responsive transcription factor At1g16060 [Source:UniProtKB/Swiss-Prot;Acc:Q94AN4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.