Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88560 | Canola | nucleus | 78.91 | 79.94 |
| Bra035137.1-P | Field mustard | nucleus | 78.59 | 79.87 |
| CDX87360 | Canola | nucleus | 77.32 | 77.07 |
| KRH47304 | Soybean | nucleus | 61.34 | 66.21 |
| AT1G16060.1 | Thale cress | nucleus | 72.84 | 66.09 |
| KRH44591 | Soybean | plastid | 61.02 | 61.02 |
| Solyc06g068570.2.1 | Tomato | nucleus | 59.42 | 59.05 |
| VIT_09s0018g01650.t01 | Wine grape | plastid | 62.3 | 54.02 |
| Solyc03g117720.2.1 | Tomato | nucleus, plastid | 62.3 | 52.56 |
| Os09t0423800-01 | Rice | nucleus | 59.74 | 51.23 |
| GSMUA_Achr5P04670_001 | Banana | nucleus | 58.15 | 50.56 |
| TraesCS6B01G153800.1 | Wheat | nucleus | 51.76 | 48.07 |
| TraesCS5D01G229400.1 | Wheat | nucleus | 60.38 | 47.73 |
| TraesCS5B01G220400.2 | Wheat | nucleus | 60.38 | 47.61 |
| TraesCS5A01G221600.1 | Wheat | nucleus | 59.74 | 47.22 |
| OQU89519 | Sorghum | plastid | 59.11 | 46.84 |
| Os08t0442400-01 | Rice | nucleus | 60.7 | 45.35 |
| Zm00001d020540_P002 | Maize | plastid | 59.11 | 45.01 |
| TraesCS6A01G125700.1 | Wheat | nucleus | 47.28 | 42.41 |
| Zm00001d032144_P001 | Maize | nucleus | 51.12 | 39.51 |
| OQU80549 | Sorghum | nucleus | 53.67 | 38.18 |
| AT3G54320.1 | Thale cress | plastid | 49.84 | 35.62 |
| AT1G72570.1 | Thale cress | nucleus | 38.66 | 29.16 |
| AT5G65510.2 | Thale cress | nucleus | 40.26 | 25.3 |
| AT5G57390.1 | Thale cress | nucleus | 40.58 | 22.76 |
| AT5G17430.1 | Thale cress | nucleus | 42.17 | 22.6 |
| AT4G37750.1 | Thale cress | nucleus | 39.62 | 22.34 |
| AT1G51190.1 | Thale cress | nucleus | 40.26 | 22.18 |
| AT3G20840.1 | Thale cress | nucleus | 38.66 | 21.08 |
| AT5G10510.3 | Thale cress | nucleus | 39.62 | 20.53 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | EntrezGene:844309 | UniProt:A8MQS2 | ProteinID:AEE36289.1 | InterPro:AP2-like_transcript_factor |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT1G79700 | EnsemblPlantsGene:AT1G79700 | RefSeq:AT1G79700 | TAIR:AT1G79700 |
| RefSeq:AT1G79700-TAIR-G | EnsemblPlants:AT1G79700.2 | TAIR:AT1G79700.2 | InterPro:DNA-bd_dom_sf | GO:GO:0000976 | GO:GO:0000981 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006357 | GO:GO:0006629 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045723 | GO:GO:1901959 | GO:GO:1904278 | InterPro:IPR001471 |
| InterPro:IPR036955 | RefSeq:NP_001077849.1 | PFAM:PF00847 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020003 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR32467 | PANTHER:PTHR32467:SF20 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00005B0D40 | SEG:seg |
Description
Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MQS2]
Coordinates
chr1:-:29990336..29993766
Molecular Weight (calculated)
35412.7 Da
IEP (calculated)
7.595
GRAVY (calculated)
-0.934
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVSGRSKK TIVDDEISDK TASASESASI ALTSKRKRKS PPRNAPLQRS SPYRGVTRHR WTGRYEAHLW DKNSWNDTQT KKGRQVYLGA YDEEEAAARA
101: YDLAALKYWG RDTLLNFPLP SYDEDVKEME GQSKEEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE AAIAYDIAAI
201: EYRGLNAVTN FDVSRYLNPN AAADKADSDS KPIRSPSREP ESSDDNKSPK SEEVIEPSTS PEVIPTRRSF PDDIQTYFGC QDSGKLATEE DVIFDCFNSY
301: INPGFYNEFD YGP
101: YDLAALKYWG RDTLLNFPLP SYDEDVKEME GQSKEEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE AAIAYDIAAI
201: EYRGLNAVTN FDVSRYLNPN AAADKADSDS KPIRSPSREP ESSDDNKSPK SEEVIEPSTS PEVIPTRRSF PDDIQTYFGC QDSGKLATEE DVIFDCFNSY
301: INPGFYNEFD YGP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.