Factsheet for Zm00001d032144_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80549	Sorghum	nucleus	81.98	75.45
TraesCS6B01G153800.1	Wheat	nucleus	47.41	56.97
CDY33356	Canola	nucleus	26.91	56.77
KRH47304	Soybean	nucleus	40.25	56.21
KRH44591	Soybean	plastid	40.99	53.04
VIT_11s0037g00870.t01	Wine grape	plastid	45.19	52.74
KRH63091	Soybean	plastid	44.44	51.87
TraesCS6A01G125700.1	Wheat	nucleus	44.44	51.58
KRH55024	Soybean	plastid	44.69	51.57
AT1G79700.2	Thale cress	nucleus	39.51	51.12
VIT_09s0018g01650.t01	Wine grape	plastid	45.19	50.69
CDX88560	Canola	nucleus	38.27	50.16
CDY35066	Canola	nucleus	40.49	49.7
Bra035137.1-P	Field mustard	nucleus	37.78	49.68
Bra026082.1-P	Field mustard	nucleus	40.25	49.39
Solyc06g068570.2.1	Tomato	nucleus	38.02	48.89
Os08t0442400-01	Rice	nucleus	50.37	48.69
CDX87360	Canola	nucleus	37.53	48.41
AT1G16060.1	Thale cress	nucleus	41.23	48.41
KRH72352	Soybean	nucleus	43.46	48.22
Zm00001d020540_P002	Maize	plastid	48.89	48.18
KRH02994	Soybean	nucleus	43.46	47.57
Solyc03g117720.2.1	Tomato	nucleus, plastid	43.46	47.44
Solyc12g010490.1.1	Tomato	plastid	41.98	46.7
PGSC0003DMT400087745	Potato	nucleus	33.33	45.92
GSMUA_Achr5P04670_001	Banana	nucleus	40.49	45.56
Zm00001d005016_P005	Maize	plastid	36.05	36.68
Zm00001d011134_P001	Maize	nucleus	36.3	35.0
Zm00001d052405_P002	Maize	plastid	32.59	30.34
Zm00001d045378_P001	Maize	nucleus	36.54	30.14
Zm00001d043116_P002	Maize	nucleus	33.58	29.44
Zm00001d028919_P001	Maize	extracellular, nucleus	28.4	27.06
Zm00001d046913_P001	Maize	nucleus	30.37	25.36
Zm00001d027878_P002	Maize	nucleus	29.88	22.41
Zm00001d018731_P001	Maize	nucleus	32.35	21.37
Zm00001d007840_P001	Maize	nucleus	31.11	21.0
Zm00001d017207_P001	Maize	nucleus	33.33	19.97
Zm00001d048004_P001	Maize	nucleus	30.86	19.0
Zm00001d034204_P001	Maize	nucleus	30.86	18.68
Zm00001d042492_P001	Maize	nucleus	31.6	18.13
Zm00001d002025_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, nucleus	30.37	17.28

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1D6KNR2	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONM04450.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR32467	PANTHER:PTHR32467:SF20	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000220EBAC	EnsemblPlantsGene:Zm00001d032144
EnsemblPlants:Zm00001d032144_P001	EnsemblPlants:Zm00001d032144_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 60AP2-like ethylene-responsive transcription factor

Coordinates

chr1:-:214378154..214380573

Molecular Weight (calculated)

44874.1 Da

IEP (calculated)

6.120

GRAVY (calculated)

-0.694

Length

405 amino acids

Sequence
(BLAST)

001: MARPRKNGGT DEDDANAATG ATGKPKKLMK RARRKSESPS PRSSAYRGVT RHRWTGRFEA HLWDKDARNG SRSKKGKQGA YDDEDAAARA HDLAALKYWG
101: PAGTVLNFPL SGYDEERREM EGQPREEYVA SLRRRSSGFA RGVSKYRGVA RHHHNGRWEA RIGRVLGNKY LYLGTYATQE EAAVAYDMAA IEHRGFNAVT
201: NFDISHYINH WHRHCHGPCD GSLGAMDVAP NVSLELDLLE CPATVGLGLE ETTGDDEFHN REDYLGHLFG VQQLPDEMGP PAHQMAPASS ALDLVLQSPR
301: FKELMQQVSA AGASETNGGS MRSSPSTSLC SFSPSPLELP SPPLQQPTEF IDGAPPRCSF PDDVQSFFDF KNDNDMSFVY AEVDTFLFGD LGAYAPPMFD
401: FDLYE

Best Arabidopsis Sequence Match ( AT1G79700.2 )
(BLAST)

001: MAKVSGRSKK TIVDDEISDK TASASESASI ALTSKRKRKS PPRNAPLQRS SPYRGVTRHR WTGRYEAHLW DKNSWNDTQT KKGRQVYLGA YDEEEAAARA
101: YDLAALKYWG RDTLLNFPLP SYDEDVKEME GQSKEEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE AAIAYDIAAI
201: EYRGLNAVTN FDVSRYLNPN AAADKADSDS KPIRSPSREP ESSDDNKSPK SEEVIEPSTS PEVIPTRRSF PDDIQTYFGC QDSGKLATEE DVIFDCFNSY
301: INPGFYNEFD YGP

Arabidopsis Description

Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MQS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.