CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032144_P001	Maize	nucleus	75.45	81.98
TraesCS6B01G153800.1	Wheat	nucleus	45.68	59.64
KRH47304	Soybean	nucleus	38.86	58.97
CDY33356	Canola	nucleus	25.68	58.85
KRH44591	Soybean	plastid	39.55	55.59
AT1G79700.2	Thale cress	nucleus	38.18	53.67
TraesCS6A01G125700.1	Wheat	nucleus	42.5	53.58
VIT_11s0037g00870.t01	Wine grape	plastid	42.05	53.31
KRH63091	Soybean	plastid	41.82	53.03
KRH55024	Soybean	plastid	42.27	52.99
CDX88560	Canola	nucleus	37.05	52.75
CDY35066	Canola	nucleus	39.55	52.73
Bra026082.1-P	Field mustard	nucleus	39.32	52.42
Os08t0442400-01	Rice	nucleus	49.77	52.27
Bra035137.1-P	Field mustard	nucleus	36.36	51.95
VIT_09s0018g01650.t01	Wine grape	plastid	42.27	51.52
AT1G16060.1	Thale cress	nucleus	40.0	51.01
CDX87360	Canola	nucleus	36.14	50.64
KRH72352	Soybean	nucleus	41.14	49.59
Solyc06g068570.2.1	Tomato	nucleus	35.45	49.52
OQU89519	Sorghum	plastid	44.09	49.11
KRH02994	Soybean	nucleus	41.14	48.92
Solyc03g117720.2.1	Tomato	nucleus, plastid	40.68	48.25
Solyc12g010490.1.1	Tomato	plastid	39.32	47.53
PGSC0003DMT400087745	Potato	nucleus	31.59	47.28
GSMUA_Achr5P04670_001	Banana	nucleus	38.41	46.94
EES09182	Sorghum	nucleus	34.09	35.71
KXG33588	Sorghum	plastid	31.14	34.34
EES19874	Sorghum	nucleus	34.55	34.31
EER89186	Sorghum	nucleus	33.86	30.53
KXG39508	Sorghum	extracellular, nucleus	27.27	28.1
EER88761	Sorghum	nucleus	28.86	26.79
KXG27285	Sorghum	nucleus	29.32	26.43
OQU93137	Sorghum	nucleus	29.09	22.42
KXG39831	Sorghum	nucleus	29.77	21.23
EER93382	Sorghum	nucleus	30.68	20.83
KXG34322	Sorghum	nucleus	31.82	20.56
KXG30667	Sorghum	nucleus	32.05	20.43
KXG33917	Sorghum	nucleus	31.59	19.77

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1Z5RAE8	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:OQU80549	ProteinID:OQU80549	ProteinID:OQU80549.1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF20	SMART:SM00380	EnsemblPlantsGene:SORBI_3007G142700
SUPFAM:SSF54171	UniParc:UPI0001A8796E	RefSeq:XP_002444429.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:+:57255666..57259735

Molecular Weight (calculated)

48000.4 Da

IEP (calculated)

5.680

GRAVY (calculated)

-0.600

Length

440 amino acids

Sequence
(BLAST)

001: MARPRKNAGT DEDNPNAATG VSVTGKPPKL KRVRRKGEPR ESSTPSQRSS AYRGVTRHRW TGRFEAHLWD KDARNGSRNK KGKQGAYDDE EAAARAHDLA
101: ALKYWGPATV LNFPLCGYDE ELREMEAQPR EEYIGSLRRR SSGFSRGVSK YRGVARHHHN GRWEARIGRV LGNKYLYLGT FATQEEAAVA YDIAAIEHRG
201: LNAVTNFDIS HYVNHWHRHC HGPSDDSLGV VVDDVAAFQL PDDLPECPAA AIGVEETTGG DAEFHNGEEG YLQHHTSGPF GAQQQLPDET GALAAHQMAP
301: NSSALDMVLQ SPKFKELMEQ VSAAAAAVAS ESSIGGSMSS SSPSPSLSSF SPSPLQLPSP SSLSSFSPSS PLQQPSPPLQ QPEFVEGAPA ARCSFPDDVQ
401: TFFDFENESD MSFMYAEVDT FLFGDLGAYA APIFHFDLDV

Best Arabidopsis Sequence Match ( AT1G16060.1 )
(BLAST)

001: MFIAVEVSPV MEDITRQSKK TSVENETGDD QSATSVVLKA KRKRRSQPRD APPQRSSVHR GVTRHRWTGR YEAHLWDKNS WNETQTKKGR QVYLGAYDEE
101: DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA
201: YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR
301: SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC

Arabidopsis Description

ADAPAP2-like ethylene-responsive transcription factor At1g16060 [Source:UniProtKB/Swiss-Prot;Acc:Q94AN4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.