CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034204_P001	Maize	nucleus	83.33	80.72
TraesCS5D01G415500.1	Wheat	nucleus	63.27	65.5
TraesCS5B01G410200.1	Wheat	nucleus	62.96	64.97
TraesCS5A01G405400.1	Wheat	nucleus	62.35	64.23
HORVU5Hr1G098450.2	Barley	nucleus	62.04	63.71
GSMUA_Achr4P32280_001	Banana	nucleus	39.04	59.81
PGSC0003DMT400055210	Potato	nucleus	25.0	56.64
CDX72655	Canola	endoplasmic reticulum, golgi	29.17	56.59
GSMUA_Achr7P00740_001	Banana	nucleus	43.06	51.57
KXG34322	Sorghum	nucleus	52.62	50.07
CDX75673	Canola	nucleus	41.05	48.54
VIT_18s0001g08610.t01	Wine grape	nucleus	49.85	47.92
Bra011782.1-P	Field mustard	nucleus	40.28	47.89
AT4G37750.1	Thale cress	nucleus	40.59	47.39
CDX69324	Canola	nucleus	40.43	47.21
KRG88628	Soybean	nucleus	35.19	47.01
Solyc02g092050.2.1	Tomato	nucleus	46.45	46.59
Bra017852.1-P	Field mustard	nucleus	39.81	46.4
VIT_07s0151g00440.t01	Wine grape	nucleus	48.46	46.31
CDY44027	Canola	nucleus	39.81	46.15
KRH52140	Soybean	nucleus	46.91	46.06
KRH61449	Soybean	nucleus	47.07	46.0
PGSC0003DMT400012588	Potato	nucleus	46.3	45.94
CDY50260	Canola	nucleus	39.51	45.71
Solyc04g077490.2.1	Tomato	nucleus	45.99	45.71
KRH15454	Soybean	nucleus	42.13	45.58
Bra010610.1-P	Field mustard	nucleus	38.89	45.57
KRH77164	Soybean	nucleus	43.06	45.37
KRH28322	Soybean	nucleus	42.75	45.26
KXG39831	Sorghum	nucleus	42.28	44.41
KRH58159	Soybean	nucleus	45.52	44.36
KRH04380	Soybean	nucleus	45.52	43.13
EER88761	Sorghum	nucleus	29.48	40.3
KXG39508	Sorghum	extracellular, nucleus	26.08	39.58
KXG27285	Sorghum	nucleus	28.55	37.91
CDY71263	Canola	nucleus	18.83	37.42
OQU93137	Sorghum	nucleus	31.02	35.2
EES09182	Sorghum	nucleus	21.14	32.62
OQU89519	Sorghum	plastid	19.6	32.15
KXG30667	Sorghum	nucleus	33.95	31.88
EES19874	Sorghum	nucleus	21.76	31.83
OQU80549	Sorghum	nucleus	20.83	30.68
KXG33917	Sorghum	nucleus	33.18	30.58
KXG33588	Sorghum	plastid	18.36	29.82
EER89186	Sorghum	nucleus	20.22	26.84

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	UniProt:C5WZ80
InterPro:DNA-bd_dom_sf	EnsemblPlants:EER93382	ProteinID:EER93382	ProteinID:EER93382.2	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	EnsemblPlantsGene:SORBI_3001G075700
SUPFAM:SSF54171	UniParc:UPI00081AC998	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:5773972..5778204

Molecular Weight (calculated)

67858.8 Da

IEP (calculated)

7.056

GRAVY (calculated)

-0.396

Length

648 amino acids

Sequence
(BLAST)

001: MTSNSSQNIS SCSTGGSDAA VGSSWLGFSL SPHMAATMDG GAADGSRGVP GQQPHGGLCY PPVVCSSPAP FGYALGGGGQ DCPANGGGGF YPGLSSMPLN
101: SDGSLCIVEA LHRSEQERHG VMVSPKLEDF LGASTAMALS LDSSSFYYGG GHGHHAHGDG HGHDQGGYLQ PLQCAVIPSS GGHDVYGGHS HLVDQQSAVA
201: MAESWFSARG GGYDVNGGGA GDIVPLQGHT HPLALSMSSG TGSQSSSITM QVGAHADAVT EYVATDGSKK RGGGGGNAGQ KQAVVHRKSI DTFGQRTSKY
301: RGVTRHRWTG RYEAHLWDNS CRKEGQARKG RQVYLGGYDM EEKAARAYDL AALKYWGKST HVNFPVEDYR EELEEMENMT RQEYVAHLRR KSSGFSRGAS
401: IYRGVTRHHQ HGRWQARIGR VSGNKDLYLG TFTNQEEAAE AYDVAAIKFR GLSAVTNFDI TRYDVEKIME SNTLLPGDQV RRKMDGQAAS AVSEADAVAS
501: ATAALVQAGG RCVADTWKIQ AAALPAVARG GGGGHEQQQQ HQDLLSSEAF SLLHDILSVD AAGTGSGSAN AHMSNSSSLA PSVSNSREQS PDRGSGGLAM
601: FFAKPAAAVP RLACPLPLGS WVSPSAVSSA RPGVSIAHLP MFAAWTDA

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.