Factsheet for GSMUA_Achr4P32280_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P00740_001	Banana	nucleus	81.32	63.59
GSMUA_Achr8P26510_001	Banana	nucleus	48.94	61.24
Os07t0124700-01	Rice	nucleus	43.74	55.89
GSMUA_Achr3P30690_001	Banana	nucleus	70.45	51.11
GSMUA_Achr3P15150_001	Banana	nucleus	66.19	50.82
GSMUA_Achr7P27500_001	Banana	nucleus	71.63	49.19
TraesCS2B01G268100.2	Wheat	nucleus	65.01	45.83
TraesCS2D01G256600.2	Wheat	nucleus	64.54	45.5
TraesCS2A01G267600.2	Wheat	nucleus	64.3	45.26
GSMUA_AchrUn_...	Banana	nucleus	41.13	43.94
Zm00001d018731_P001	Maize	nucleus	62.88	43.39
Zm00001d007840_P001	Maize	nucleus	61.47	43.33
GSMUA_Achr1P24940_001	Banana	nucleus	33.81	42.43
TraesCS5D01G415500.1	Wheat	nucleus	60.05	40.58
TraesCS5B01G410200.1	Wheat	nucleus	60.05	40.45
KXG34322	Sorghum	nucleus	65.01	40.38
TraesCS5A01G405400.1	Wheat	nucleus	59.57	40.06
Zm00001d034204_P001	Maize	nucleus	62.88	39.76
GSMUA_Achr9P13660_001	Banana	nucleus	40.9	39.68
EER93382	Sorghum	nucleus	59.81	39.04
HORVU5Hr1G098450.2	Barley	nucleus	57.92	38.83
GSMUA_AchrUn_...	Banana	nucleus	42.08	37.95
GSMUA_Achr3P05070_001	Banana	nucleus	40.66	37.8
GSMUA_Achr5P04670_001	Banana	nucleus	30.73	36.11
GSMUA_Achr1P21950_001	Banana	nucleus	47.28	35.52
GSMUA_Achr8P09350_001	Banana	plastid	30.26	35.36
GSMUA_Achr8P09110_001	Banana	nucleus	48.7	34.68
GSMUA_Achr2P05880_001	Banana	nucleus	46.1	34.09
GSMUA_Achr3P09410_001	Banana	nucleus	28.84	34.08
GSMUA_Achr5P25620_001	Banana	nucleus	43.74	34.01
GSMUA_Achr9P07890_001	Banana	nucleus	48.94	33.17
GSMUA_Achr1P12410_001	Banana	nucleus	42.55	32.67
GSMUA_Achr3P21460_001	Banana	nucleus	46.81	32.35
GSMUA_Achr6P28550_001	Banana	nucleus	48.46	32.08
GSMUA_Achr3P03630_001	Banana	plastid	30.73	31.4
GSMUA_Achr11P...	Banana	nucleus	37.35	28.62
GSMUA_Achr3P32510_001	Banana	nucleus	26.24	26.24

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ncoils:Coil
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr4G32280_001	EnsemblPlants:GSMUA_Achr4P32280_001	EnsemblPlants:GSMUA_Achr4T32280_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0STZ0
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0002960AA1	SEG:seg	:	:	:

Description

Putative AP2-like ethylene-responsive transcription factor ANT [Source:GMGC_GENE;Acc:GSMUA_Achr4G32280_001]

Coordinates

chr4:-:29118837..29121639

Molecular Weight (calculated)

46515.4 Da

IEP (calculated)

8.072

GRAVY (calculated)

-0.578

Length

423 amino acids

Sequence
(BLAST)

001: MEVPADPHHH HQSQPPPGAV SAASASFFLS PQLSSSGFSY GVSENGGYYS QLSSMPLKSN GSLCLMEALS RSHEQAMVPS PSPKLEDFLG CGPNMGTHHN
101: GDVGDGMGSG PVAAMGYGDL QSLSLSMSPV SQSSCVTAPQ HASSSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCKRE GQTRKGRQVY LGGYDMEEKA
201: ARAYDLAALK YWGTSTHINF MLEDYREELE EMKNMSRQEY VAHLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVSGN KDLYLGTFST QEEAAEAYDI
301: AAIKFRGLNA VTNFDISRYH VEKIMASSTL LAGELARRNN NVEPSAPSSN RELNLTADNI TSSYHLGSSR EGSPDRTDIS MLFAKTPPKL ISPTPLHSWM
401: PSTQLRSALP LSHMPVFAAW TDA

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.