Factsheet for GSMUA_Achr3P15150_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26510_001	Banana	nucleus	42.65	69.53
GSMUA_Achr4P32280_001	Banana	nucleus	50.82	66.19
GSMUA_Achr7P00740_001	Banana	nucleus	57.53	58.6
GSMUA_Achr3P30690_001	Banana	nucleus	60.62	57.29
CDX72655	Canola	endoplasmic reticulum, golgi	33.39	55.09
GSMUA_Achr7P27500_001	Banana	nucleus	61.52	55.03
PGSC0003DMT400055210	Potato	nucleus	28.49	54.9
VIT_07s0151g00440.t01	Wine grape	nucleus	62.43	50.74
KRH52140	Soybean	nucleus	58.08	48.48
CDX75673	Canola	nucleus	48.09	48.36
Solyc04g077490.2.1	Tomato	nucleus	56.99	48.16
PGSC0003DMT400012588	Potato	nucleus	56.99	48.09
AT4G37750.1	Thale cress	nucleus	48.09	47.75
Bra011782.1-P	Field mustard	nucleus	47.19	47.71
CDX69324	Canola	nucleus	47.73	47.39
KRH58159	Soybean	nucleus	57.17	47.37
KRH61449	Soybean	nucleus	56.99	47.36
KRH04380	Soybean	nucleus	58.26	46.93
CDY44027	Canola	nucleus	47.19	46.51
Solyc02g092050.2.1	Tomato	nucleus	54.45	46.44
Bra017852.1-P	Field mustard	nucleus	46.82	46.4
GSMUA_AchrUn_...	Banana	nucleus	33.03	45.96
Bra010610.1-P	Field mustard	nucleus	45.92	45.75
CDY50260	Canola	nucleus	46.46	45.71
GSMUA_Achr1P24940_001	Banana	nucleus	27.95	45.7
KRH77164	Soybean	nucleus	50.09	44.88
KRH28322	Soybean	nucleus	49.55	44.61
GSMUA_Achr9P13660_001	Banana	nucleus	33.39	42.2
GSMUA_Achr3P05070_001	Banana	nucleus	32.85	39.78
GSMUA_AchrUn_...	Banana	nucleus	33.21	39.02
GSMUA_Achr8P09110_001	Banana	nucleus	41.02	38.05
GSMUA_Achr5P25620_001	Banana	nucleus	37.02	37.5
GSMUA_Achr1P21950_001	Banana	nucleus	38.11	37.3
GSMUA_Achr2P05880_001	Banana	nucleus	38.48	37.06
CDY71263	Canola	nucleus	21.6	36.5
GSMUA_Achr9P07890_001	Banana	nucleus	40.65	35.9
GSMUA_Achr3P21460_001	Banana	nucleus	39.75	35.78
GSMUA_Achr5P04670_001	Banana	nucleus	23.05	35.28
GSMUA_Achr6P28550_001	Banana	nucleus	40.65	35.05
GSMUA_Achr3P09410_001	Banana	nucleus	22.69	34.92
GSMUA_Achr8P09350_001	Banana	plastid	22.69	34.53
GSMUA_Achr1P12410_001	Banana	nucleus	34.3	34.3
GSMUA_Achr3P03630_001	Banana	plastid	23.96	31.88
GSMUA_Achr11P...	Banana	nucleus	29.58	29.53
GSMUA_Achr3P32510_001	Banana	nucleus	19.96	26.0

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G15150_001
EnsemblPlants:GSMUA_Achr3P15150_001	EnsemblPlants:GSMUA_Achr3T15150_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0SET1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000294DB2A	SEG:seg	:	:	:	:

Description

Putative AP2-like ethylene-responsive transcription factor ANT [Source:GMGC_GENE;Acc:GSMUA_Achr3G15150_001]

Coordinates

chr3:+:15690724..15693247

Molecular Weight (calculated)

60553.7 Da

IEP (calculated)

7.512

GRAVY (calculated)

-0.688

Length

551 amino acids

Sequence
(BLAST)

001: MESMSSNNWL GFSLSTHMNT EVSSEPPHRQ TRPALAAAPT AVACNSGVCY GMEDENGGGL YSQLSIMPLK SDGSLCNMEA LRRSQQEGMM MPSPSPKLAD
101: FLSGGQHMGI HHQYENNDRA AIALSLDSMH RNEESETGGH VNQMQVQQQL NWVHWHHNAC NNGSCEEGGL GAGNPVGAMG YGHLQSLSLS MSPGAQSIYV
201: TAPLQTSAAV ATECMASDAP RKRRTGKGGR KQPVHRKSVD TFGQRTSQYR GVTRHRWTGR YEAHLWDNTC KQEGQTRKGR QVYLGGYDME EKAARAYDLA
301: ALKYWGSSTH INFPSENYQQ ELDEMKSMTR QEYVAHLRRR SSGFSRGASM YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIRFRG
401: VNAVTNFDIA RYDVEKIMAS STLLSGELAR RSNKATDAGK EPPPAQDSCR DLTEESSSGA GWKMDFQQQT PPSEYRSPME FSPVLHGLVV GSSRSMQAVG
501: DTDRLGKSLS SSVDQTELSL LYAKGSSPEF TGSTWAPSAP HMPVFAAWGD A

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.