Factsheet for GSMUA_Achr3P30690_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P27500_001	Banana	nucleus	85.25	80.68
GSMUA_Achr8P26510_001	Banana	nucleus	40.99	70.71
GSMUA_Achr4P32280_001	Banana	nucleus	51.11	70.45
PGSC0003DMT400055210	Potato	nucleus	30.53	62.24
GSMUA_Achr3P15150_001	Banana	nucleus	57.29	60.62
GSMUA_Achr7P00740_001	Banana	nucleus	55.4	59.7
CDX72655	Canola	endoplasmic reticulum, golgi	33.28	58.08
VIT_07s0151g00440.t01	Wine grape	nucleus	63.81	54.87
KRH52140	Soybean	nucleus	60.38	53.33
KRH61449	Soybean	nucleus	60.21	52.94
PGSC0003DMT400012588	Potato	nucleus	58.66	52.37
Solyc04g077490.2.1	Tomato	nucleus	58.32	52.15
KRH58159	Soybean	nucleus	57.8	50.68
KRH04380	Soybean	nucleus	58.49	49.85
Solyc02g092050.2.1	Tomato	nucleus	55.23	49.85
CDX75673	Canola	nucleus	46.31	49.27
KRH28322	Soybean	nucleus	51.46	49.02
Bra011782.1-P	Field mustard	nucleus	45.45	48.62
CDX69324	Canola	nucleus	46.14	48.47
AT4G37750.1	Thale cress	nucleus	46.14	48.47
KRH77164	Soybean	nucleus	50.6	47.97
Bra017852.1-P	Field mustard	nucleus	45.45	47.66
CDY44027	Canola	nucleus	44.94	46.87
CDY50260	Canola	nucleus	44.77	46.61
Bra010610.1-P	Field mustard	nucleus	43.74	46.11
GSMUA_Achr1P24940_001	Banana	nucleus	25.56	44.21
GSMUA_AchrUn_...	Banana	nucleus	29.67	43.69
GSMUA_Achr9P13660_001	Banana	nucleus	32.08	42.89
GSMUA_Achr3P05070_001	Banana	nucleus	32.42	41.54
GSMUA_AchrUn_...	Banana	nucleus	32.25	40.09
GSMUA_Achr1P21950_001	Banana	nucleus	36.71	38.01
GSMUA_Achr5P25620_001	Banana	nucleus	34.99	37.5
CDY71263	Canola	nucleus	20.93	37.42
GSMUA_Achr8P09110_001	Banana	nucleus	38.08	37.37
GSMUA_Achr2P05880_001	Banana	nucleus	35.85	36.54
GSMUA_Achr1P12410_001	Banana	nucleus	33.96	35.93
GSMUA_Achr9P07890_001	Banana	nucleus	37.91	35.42
GSMUA_Achr8P09350_001	Banana	plastid	21.96	35.36
GSMUA_Achr5P04670_001	Banana	nucleus	21.61	35.0
GSMUA_Achr3P09410_001	Banana	nucleus	21.44	34.92
GSMUA_Achr3P21460_001	Banana	nucleus	36.19	34.48
GSMUA_Achr6P28550_001	Banana	nucleus	37.39	34.12
GSMUA_Achr3P03630_001	Banana	plastid	23.16	32.61
GSMUA_Achr11P...	Banana	nucleus	27.96	29.53
GSMUA_Achr3P32510_001	Banana	nucleus	19.9	27.42

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G30690_001
EnsemblPlants:GSMUA_Achr3P30690_001	EnsemblPlants:GSMUA_Achr3T30690_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0SJ83	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0002950579	SEG:seg	:	:	:	:

Description

AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G30690_001]

Coordinates

chr3:-:29320456..29323507

Molecular Weight (calculated)

63496.1 Da

IEP (calculated)

7.096

GRAVY (calculated)

-0.644

Length

583 amino acids

Sequence
(BLAST)

001: MNMEVSSEPH HHHHHNHHES HHHQTQTTTA GVSSGVPCSL FLSPQLSSTE ICYGGEGENG GLYSQLPVMP LKSDGSLCIM EALSRSQQQG IVPSPPPKLE
101: DFLGGGPNMG ADHHCGNYDR EAMALSLDSM YYYQNSETQG NGAHSLDALH GQQHHQLFLQ PLQGGILKNW VARNYNACDS GLGEEGGIGP SSIGAVGFGE
201: LQSLSLSMSP GSQSSCVTAP AQPVHRKSID TFGQRTSQYR GVTRHRWTGR YEAHLWDNSC KKEGQTRKGR QVYLGGYDTE EKAARAYDLA ALKYWGPSTH
301: INFPLESYGD ELEEMKNMSR QEYVAHLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG VNAVTNFDIT
401: RYDVEKIMAS STLLPGELAR KHKAIEAGKD APSGKNPSRD PTEENNTAGS GWKMVLYQSA QHKPPSTGSH AHEPMIMGGE YRSPMTFPAA LHGLIGVEAG
501: SSVQGVDDSE KMSNAHLSNQ SSLVTSLGSS REGSPDRTGL SMMYVNASTK FNPTPMSSSA PPAQPRPTIA MSQMPVFAAW NDV

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.