Factsheet for GSMUA_Achr1P12410_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0176300-00	Rice	mitochondrion	28.49	92.35
GSMUA_Achr1P21950_001	Banana	nucleus	57.71	56.48
GSMUA_Achr8P26510_001	Banana	nucleus	30.49	49.7
GSMUA_Achr1P24940_001	Banana	nucleus	27.95	45.7
GSMUA_AchrUn_...	Banana	nucleus	32.67	45.45
GSMUA_Achr9P13660_001	Banana	nucleus	34.48	43.58
TraesCS4B01G292900.1	Wheat	nucleus	40.83	42.61
TraesCS4A01G011600.1	Wheat	nucleus	40.83	42.61
TraesCS4D01G291300.1	Wheat	nucleus	40.65	42.59
GSMUA_Achr4P32280_001	Banana	nucleus	32.67	42.55
GSMUA_Achr3P05070_001	Banana	nucleus	34.3	41.54
Zm00001d027878_P002	Maize	nucleus	39.56	40.37
GSMUA_AchrUn_...	Banana	nucleus	34.3	40.3
HORVU4Hr1G076200.4	Barley	nucleus	39.56	39.56
OQU93137	Sorghum	nucleus	40.83	39.4
GSMUA_Achr5P25620_001	Banana	nucleus	35.93	36.4
GSMUA_Achr7P00740_001	Banana	nucleus	35.21	35.86
GSMUA_Achr2P05880_001	Banana	nucleus	37.02	35.66
GSMUA_Achr8P09350_001	Banana	plastid	23.41	35.64
GSMUA_Achr8P09110_001	Banana	nucleus	38.11	35.35
GSMUA_Achr5P04670_001	Banana	nucleus	22.87	35.0
GSMUA_Achr3P15150_001	Banana	nucleus	34.3	34.3
GSMUA_Achr3P21460_001	Banana	nucleus	37.75	33.99
GSMUA_Achr3P30690_001	Banana	nucleus	35.93	33.96
GSMUA_Achr9P07890_001	Banana	nucleus	38.11	33.65
GSMUA_Achr6P28550_001	Banana	nucleus	38.29	33.02
GSMUA_Achr3P09410_001	Banana	nucleus	21.05	32.4
GSMUA_Achr7P27500_001	Banana	nucleus	35.39	31.66
GSMUA_Achr3P03630_001	Banana	plastid	23.41	31.16
GSMUA_Achr11P...	Banana	nucleus	28.31	28.26
GSMUA_Achr3P32510_001	Banana	nucleus	19.78	25.77
Os03t0770700-01	Rice	plastid	11.07	17.99

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr1G12410_001
EnsemblPlants:GSMUA_Achr1P12410_001	EnsemblPlants:GSMUA_Achr1T12410_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0RZ99	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF72	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0002956123	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G12410_001]

Coordinates

chr1:+:9461256..9469048

Molecular Weight (calculated)

60982.4 Da

IEP (calculated)

7.142

GRAVY (calculated)

-0.503

Length

551 amino acids

Sequence
(BLAST)

001: MHVDWRHSAI ATTTSCSNPE EQGPKFEDFL GGYSENLNEE NQNLQQPIYH FHDMYYHSSD GPGINVNMPP SFSPAEGGTG EDIQVPYHHI HSFHHNHLFQ
101: DPNAIKPPFF MTDPNQNFTA SAIYNLGMDG STSISGMKSW LRQNQHIPEK QSVDAYECNI QSLSLSMVDR EPVPRKSIET FGQRTSQYRG VTRHRWTGRY
201: EAHLWDNSCR KEGQKRKGRQ AVYLGGYDKE EKAARAYDLA ALKYWGPTTH TNFPLSSYQK DLEEMKDMTR QEFVANLRRK SSGFSRGASV YRGVTRHHQH
301: GRWQARIGRV AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG LNAVTNFDMS KYDVKHICSS SHLFGGDLGK RSPKSTPTTS ASANMNQPTS LVVANSEDFS
401: NMLSNTKSDS TSNRVPADAV SLISSSITNP NLWMERQGAE GTIIPTTACM GTFLRHSFAL LQLGQRQGVR VHGAAEALRT LGAVLVEVEV AAVAPVANPV
501: AGDAAPVADE ALLASAGQDA AWVGEMAYPR HSLSLSLSLS LSLALCVMLW L

Best Arabidopsis Sequence Match ( AT1G72570.1 )
(BLAST)

001: MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH

Arabidopsis Description

AIL1AP2-like ethylene-responsive transcription factor AIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFE1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.