Factsheet for GSMUA_Achr1P21950_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P12410_001	Banana	nucleus	56.48	57.71
GSMUA_Achr8P26510_001	Banana	nucleus	31.08	51.78
VIT_09s0002g01370.t01	Wine grape	nucleus	45.83	47.87
GSMUA_AchrUn_...	Banana	nucleus	33.39	47.47
GSMUA_Achr4P32280_001	Banana	nucleus	35.52	47.28
GSMUA_Achr1P24940_001	Banana	nucleus	27.71	46.29
GSMUA_Achr9P13660_001	Banana	nucleus	35.52	45.87
KRH06179	Soybean	nucleus	46.71	45.82
KRH47597	Soybean	nucleus	46.36	45.08
GSMUA_Achr3P05070_001	Banana	nucleus	36.06	44.62
GSMUA_AchrUn_...	Banana	nucleus	36.59	43.92
GSMUA_Achr8P09110_001	Banana	nucleus	42.98	40.74
GSMUA_Achr5P25620_001	Banana	nucleus	38.9	40.26
GSMUA_Achr2P05880_001	Banana	nucleus	40.5	39.86
GSMUA_Achr9P07890_001	Banana	nucleus	43.69	39.42
GSMUA_Achr3P21460_001	Banana	nucleus	42.81	39.38
GSMUA_Achr7P00740_001	Banana	nucleus	36.94	38.45
GSMUA_Achr3P15150_001	Banana	nucleus	37.3	38.11
GSMUA_Achr6P28550_001	Banana	nucleus	42.45	37.4
GSMUA_Achr8P09350_001	Banana	plastid	23.98	37.29
GSMUA_Achr3P30690_001	Banana	nucleus	38.01	36.71
GSMUA_Achr5P04670_001	Banana	nucleus	22.56	35.28
GSMUA_Achr3P09410_001	Banana	nucleus	22.2	34.92
GSMUA_Achr7P27500_001	Banana	nucleus	37.3	34.09
GSMUA_Achr3P03630_001	Banana	plastid	24.16	32.85
GSMUA_Achr11P...	Banana	nucleus	30.02	30.62
GSMUA_Achr3P32510_001	Banana	nucleus	19.01	25.3

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr1G21950_001
EnsemblPlants:GSMUA_Achr1P21950_001	EnsemblPlants:GSMUA_Achr1T21950_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0S203	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00029606F6	SEG:seg	:	:	:	:

Description

AP2 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G21950_001]

Coordinates

chr1:+:16459206..16462342

Molecular Weight (calculated)

61370.2 Da

IEP (calculated)

6.096

GRAVY (calculated)

-0.685

Length

563 amino acids

Sequence
(BLAST)

001: MSGWLGFSLS SSSRGDGSCC CEEDQFGGGG EGSGGGGGGG GGGDDGRVEL GFASSNPLVL MPLRSDGSIC LMEPPPLRHT PYWKYGAIAT TTDGSSNPEE
101: EGPKFEDFLG GYSEHTNEES PNLQQPISHF HAMYPGINVN MPPSIIPAAE GRTEEDVHDP YHYIQSFHPF QDPTTLRPSP LATDPIYSVG TDGSISISGM
201: KSWLRQNQYA PEKQPADGAA DDPSRLNAKS AARETVPRKS IETFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCRKEGQTRK GRQVYLGGYD KEEKAARAYD
301: LAALKYWGPT THTNLPLSTY EKELEEMKNM SRQEFVANLR RKSSGFSRGA SVYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF
401: RGPNAVTNFD IGRYDVKRIC SSNHLIGGDL AKRTPPKDSS PMSLETDHRP CPAVTKSGIA GAEDDFSDML CNPKLDDTSN RLLLAEVAPV VSSSPGNPIS
501: YHSMCGDFSQ AFLYPTAMKY ECGDGSSNGG NGDGGSMNWM VAAARPTELP AVNQLPMFAL WND

Best Arabidopsis Sequence Match ( AT1G72570.1 )
(BLAST)

001: MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH

Arabidopsis Description

AIL1AP2-like ethylene-responsive transcription factor AIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFE1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.