Factsheet for VIT_09s0002g01370.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0176300-00	Rice	mitochondrion	28.94	91.76
KRH47597	Soybean	nucleus	63.82	59.41
KRH06179	Soybean	nucleus	62.71	58.88
TraesCS4D01G291300.1	Wheat	nucleus	45.83	46.96
TraesCS4B01G292900.1	Wheat	nucleus	45.83	46.78
TraesCS4A01G011600.1	Wheat	nucleus	45.45	46.4
GSMUA_Achr1P21950_001	Banana	nucleus	47.87	45.83
Zm00001d027878_P002	Maize	nucleus	45.83	45.74
HORVU4Hr1G076200.4	Barley	nucleus	45.27	44.28
VIT_11s0052g00840.t01	Wine grape	nucleus	39.89	42.91
OQU93137	Sorghum	nucleus	45.45	42.91
VIT_06s0004g01800.t01	Wine grape	nucleus	42.49	41.64
VIT_00s0772g00020.t01	Wine grape	nucleus	35.25	41.48
VIT_00s1291g00010.t01	Wine grape	nucleus	36.73	38.6
VIT_01s0026g01690.t01	Wine grape	nucleus	23.75	38.44
VIT_11s0037g00870.t01	Wine grape	plastid	24.49	38.04
VIT_04s0023g00950.t01	Wine grape	nucleus	28.94	37.59
VIT_09s0018g01650.t01	Wine grape	plastid	24.68	36.84
VIT_18s0001g08610.t01	Wine grape	nucleus	43.97	35.16
VIT_07s0151g00440.t01	Wine grape	nucleus	41.93	33.33
VIT_13s0047g00340.t01	Wine grape	plastid	22.82	33.15
VIT_14s0108g00050.t01	Wine grape	nucleus	24.49	32.67
Os03t0770700-01	Rice	plastid	15.4	24.48

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:CCB59299
ProteinID:CCB59299.1	InterPro:DNA-bd_dom_sf	UniProt:F6HXX6	EMBL:FN596494	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF72	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000210A761	ArrayExpress:VIT_09s0002g01370	EnsemblPlantsGene:VIT_09s0002g01370	EnsemblPlants:VIT_09s0002g01370.t01	SEG:seg	:

Description

No Description!

Coordinates

chr9:-:1150521..1153564

Molecular Weight (calculated)

59515.4 Da

IEP (calculated)

6.851

GRAVY (calculated)

-0.824

Length

539 amino acids

Sequence
(BLAST)

001: MSNWLGFSLT PHLRIDEGFG RDEQHQQQGG FVMPLRSDGS LCVIDPFRRP SGSEDWRYEN DMGGTDPSGE APKLEDFLGC CYSNSSDDRV NVNAPPSFNS
101: NGELEADPPP QIQPYHHHYN ETPQTLVTTT QIQQQCGSNP SGHNNCFYHV PFDHSATSVS GFKSWLRQTP FSGEKSSSSA SADQPNNCNF QSLSLTMKPV
201: PRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCRKEG QTRKGRQGGY DKEEKAARAY DLAALKYWGP TTHINFPLSS YEKELEEMKN MTRQEFVANL
301: RRKSSGFSRG ASVYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK FRGTGAVTNF DISRYDVKRI CSSSTLIAGD LAKRSPKESA
401: PPALEDYNSC ASSTSPQPLL AITNGEPSEE LPDMVWSSNT EDHQQQQNTS IIATDTALVA STSRTSSSLH SPKCPGGGSG GPGADQFGAG GADYPQAYFS
501: LHGSKYEASN AGGDHPGSDR LRNLGMVHHQ VPMFALWNE

Best Arabidopsis Sequence Match ( AT1G72570.1 )
(BLAST)

001: MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH

Arabidopsis Description

AIL1AP2-like ethylene-responsive transcription factor AIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFE1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.