Factsheet for Os03t0176300-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0813300-00	Rice	nucleus	48.24	64.57
Os07t0124700-01	Rice	nucleus	75.29	38.67
Os06t0145700-00	Rice	nucleus	64.12	33.85
Os09t0423800-01	Rice	nucleus	71.18	33.15
Os06t0657500-02	Rice	nucleus	89.41	32.41
TraesCS4D01G291300.1	Wheat	nucleus	99.41	32.13
TraesCS4B01G292900.1	Wheat	nucleus	99.41	32.01
TraesCS4A01G011600.1	Wheat	nucleus	98.82	31.82
Os03t0313100-01	Rice	extracellular, nucleus	78.24	30.86
HORVU4Hr1G076200.4	Barley	nucleus	98.24	30.31
Zm00001d027878_P002	Maize	nucleus	95.88	30.19
Os04t0653600-01	Rice	nucleus	87.65	30.1
Os08t0442400-01	Rice	nucleus	71.76	29.12
OQU93137	Sorghum	nucleus	97.65	29.07
VIT_09s0002g01370.t01	Wine grape	nucleus	91.76	28.94
GSMUA_Achr1P12410_001	Banana	nucleus	92.35	28.49
KRH06179	Soybean	nucleus	94.12	27.87
Os05t0536250-00	Rice	nucleus	70.0	27.61
KRH47597	Soybean	nucleus	93.53	27.46
Os12t0126300-00	Rice	nucleus	71.76	27.35
Os11t0295900-01	Rice	nucleus	88.24	26.83
Os02t0614300-01	Rice	mitochondrion, nucleus	47.06	24.92
Os04t0504500-01	Rice	nucleus	90.0	23.25
Os03t0232200-01	Rice	nucleus	87.65	23.21
Os01t0899800-01	Rice	nucleus	91.18	22.3
Os03t0770700-01	Rice	plastid	21.18	10.62

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os03g0176300	EnsemblPlants:Os03t0176300-00	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0003938BEF	SEG:seg	:	:	:	:

Description

PLETHORA 10Hypothetical conserved gene. (Os03t0176300-00)

Coordinates

chr3:-:4057561..4059890

Molecular Weight (calculated)

19838.2 Da

IEP (calculated)

10.238

GRAVY (calculated)

-0.966

Length

170 amino acids

Sequence
(BLAST)

001: QRTSQFRGVT RHRWTGRYEA HLWDNTCRKE GQTRKGRQVY LGGYDKEEKA ARAYDLAALK YWGPTTHINF PLSTYEKELE EMKHMTRQEF IAHLRRNSSG
101: FSRGASMYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGLNA VTNFDISKYD

Best Arabidopsis Sequence Match ( AT1G72570.1 )
(BLAST)

001: MKKWLGFSLT PPLRICNSEE EELRHDGSDV WRYDINFDHH HHDEDVPKVE DLLSNSHQTE YPINHNQTNV NCTTVVNRLN PPGYLLHDQT VVTPHYPNLD
101: PNLSNDYGGF ERVGSVSVFK SWLEQGTPAF PLSSHYVTEE AGTSNNISHF SNEETGYNTN GSMLSLALSH GACSDLINES NVSARVEEPV KVDEKRKRLV
201: VKPQVKESVP RKSVDSYGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRRGRQVYLG GYDEEEKAAR AYDLAALKYW GPTTHLNFPL SNYEKEIEEL
301: NNMNRQEFVA MLRRNSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDINRYDVK RICSSSTIVD
401: SDQAKHSPTS SGAGH

Arabidopsis Description

AIL1AP2-like ethylene-responsive transcription factor AIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFE1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.