Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0176300-00 | Rice | mitochondrion | 64.57 | 48.24 |
| Os06t0145700-00 | Rice | nucleus | 70.08 | 27.64 |
| TraesCS4B01G136400.1 | Wheat | plastid | 70.08 | 26.97 |
| TraesCS4D01G131200.1 | Wheat | plastid | 70.08 | 25.07 |
| Os09t0423800-01 | Rice | nucleus | 71.65 | 24.93 |
| KXG33588 | Sorghum | plastid | 77.95 | 24.81 |
| TraesCS4A01G181300.1 | Wheat | plastid | 69.29 | 24.38 |
| TraesCS3B01G368400.1 | Wheat | plastid | 71.65 | 23.64 |
| CDX78230 | Canola | plastid | 77.17 | 23.61 |
| KRH13193 | Soybean | nucleus | 76.38 | 23.54 |
| CDX73488 | Canola | nucleus | 76.38 | 23.49 |
| TraesCS3D01G330400.1 | Wheat | plastid | 69.29 | 23.34 |
| CDX67595 | Canola | plastid | 75.59 | 23.08 |
| Bra007066.1-P | Field mustard | plastid | 74.8 | 23.06 |
| GSMUA_Achr3P09410_001 | Banana | nucleus | 64.57 | 22.91 |
| VIT_13s0047g00340.t01 | Wine grape | plastid | 66.14 | 22.64 |
| Bra003178.1-P | Field mustard | plastid | 73.23 | 22.52 |
| KRH44733 | Soybean | nucleus | 74.8 | 22.3 |
| Os08t0442400-01 | Rice | nucleus | 73.23 | 22.2 |
| AT3G54320.1 | Thale cress | plastid | 76.38 | 22.15 |
| Os07t0124700-01 | Rice | nucleus | 56.69 | 21.75 |
| Solyc01g096860.1.1 | Tomato | nucleus | 75.59 | 21.67 |
| Os05t0536250-00 | Rice | nucleus | 72.44 | 21.35 |
| PGSC0003DMT400070735 | Potato | nucleus | 72.44 | 21.2 |
| Os12t0126300-00 | Rice | nucleus | 71.65 | 20.4 |
| Zm00001d043116_P002 | Maize | nucleus | 70.87 | 19.48 |
| Os03t0313100-01 | Rice | extracellular, nucleus | 59.06 | 17.4 |
| Os06t0657500-02 | Rice | nucleus | 62.2 | 16.84 |
| Os04t0653600-01 | Rice | nucleus | 63.78 | 16.36 |
| Os11t0295900-01 | Rice | nucleus | 62.2 | 14.13 |
| Os03t0232200-01 | Rice | nucleus | 64.57 | 12.77 |
| Os04t0504500-01 | Rice | nucleus | 62.99 | 12.16 |
| Os02t0614300-01 | Rice | mitochondrion, nucleus | 30.71 | 12.15 |
| Os01t0899800-01 | Rice | nucleus | 64.57 | 11.8 |
| Os03t0770700-01 | Rice | plastid | 12.6 | 4.72 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EMBL:AY685121 | ProteinID:BAS74892.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlantsGene:Os01g0813300 | EnsemblPlants:Os01t0813300-00 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PFscan:PS51032 | PANTHER:PTHR32467 | UniProt:Q2TQ30 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI0000679B0A | : | : | : | : |
Description
APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 79Similar to AP2/EREBP transcription factor. (Os01t0813300-00)
Coordinates
chr1:+:34575196..34576640
Molecular Weight (calculated)
14884.6 Da
IEP (calculated)
10.714
GRAVY (calculated)
-1.066
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: HRGSGKYEAH LWDKQGWNPN QTRKRGRQVY LGAYDTEEAA ARTYDLAALK IWGSDHVLNF PIDTYRKELE RMQRMTREEY LATLRRKSSG FSRGVSKYRG
101: VAKHHHNGRW EARIGRAVGK KYLYLGT
101: VAKHHHNGRW EARIGRAVGK KYLYLGT
001: MAKVSGRSKK TIVDDEISDK TASASESASI ALTSKRKRKS PPRNAPLQRS SPYRGVTRHR WTGRYEAHLW DKNSWNDTQT KKGRQVYLGA YDEEEAAARA
101: YDLAALKYWG RDTLLNFPLP SYDEDVKEME GQSKEEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE AAIAYDIAAI
201: EYRGLNAVTN FDVSRYLNPN AAADKADSDS KPIRSPSREP ESSDDNKSPK SEEVIEPSTS PEVIPTRRSF PDDIQTYFGC QDSGKLATEE DVIFDCFNSY
301: INPGFYNEFD YGP
101: YDLAALKYWG RDTLLNFPLP SYDEDVKEME GQSKEEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE AAIAYDIAAI
201: EYRGLNAVTN FDVSRYLNPN AAADKADSDS KPIRSPSREP ESSDDNKSPK SEEVIEPSTS PEVIPTRRSF PDDIQTYFGC QDSGKLATEE DVIFDCFNSY
301: INPGFYNEFD YGP
Arabidopsis Description
Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MQS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.