Factsheet for Os01t0899800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0176300-00	Rice	mitochondrion	22.3	91.18
KXG33917	Sorghum	nucleus	74.82	73.97
Zm00001d042492_P001	Maize	nucleus	73.67	72.52
TraesCS3A01G395500.1	Wheat	nucleus	69.06	68.38
HORVU3Hr1G089160.2	Barley	nucleus	64.46	67.88
TraesCS3D01G389100.1	Wheat	nucleus	69.64	64.71
Os01t0813300-00	Rice	nucleus	11.8	64.57
TraesCS3B01G427300.1	Wheat	nucleus, plastid	69.06	64.09
GSMUA_Achr5P25620_001	Banana	nucleus	41.3	52.76
GSMUA_Achr8P09110_001	Banana	nucleus	43.88	51.35
Os07t0124700-01	Rice	nucleus	23.02	48.34
Os02t0614300-01	Rice	mitochondrion, nucleus	22.01	47.66
Os06t0657500-02	Rice	nucleus	32.09	47.55
Os04t0504500-01	Rice	nucleus	42.3	44.68
Os11t0295900-01	Rice	nucleus	35.4	44.01
Os04t0653600-01	Rice	nucleus	29.93	42.02
Os03t0313100-01	Rice	extracellular, nucleus	25.32	40.84
Os06t0145700-00	Rice	nucleus	17.84	38.51
Os09t0423800-01	Rice	nucleus	20.14	38.36
Os03t0232200-01	Rice	nucleus	32.09	34.74
Os08t0442400-01	Rice	nucleus	19.57	32.46
Os05t0536250-00	Rice	nucleus	19.71	31.79
Os12t0126300-00	Rice	nucleus	19.86	30.94
Os03t0770700-01	Rice	plastid	10.79	22.12

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	EntrezGene:4325035	UniProt:A0A0P0VBN0	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:BAS75739.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os01g0899800	EnsemblPlants:Os01t0899800-01
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF42	SMART:SM00380
SUPFAM:SSF54171	UniParc:UPI0001C7F9E1	RefSeq:XP_015634444.1	SEG:seg	:	:

Description

PLETHORA 5Pathogenesis-related transcriptional factor and ERF domain containing protein. (Os01t0899800-01)

Coordinates

chr1:-:39141130..39145472

Molecular Weight (calculated)

71894.3 Da

IEP (calculated)

7.067

GRAVY (calculated)

-0.296

Length

695 amino acids

Sequence
(BLAST)

001: MATMNNWLAF SLSPQDQLPP SQTNSTLISA AATTTTAGDS STGDVCFNIP QDWSMRGSEL SALVAEPKLE DFLGGISFSE QQHHHGGKGG VIPSSAAACY
101: ASSGSSVGYL YPPPSSSSLQ FADSVMVATS SPVVAHDGVS GGGMVSAAAA AAASGNGGIG LSMIKNWLRS QPAPQPAQAL SLSMNMAGTT TAQGGGAMAL
201: LAGAGERGRT TPASESLSTS AHGATTATMA GGRKEINEEG SGSAGAVVAV GSESGGSGAV VEAGAAAAAA RKSVDTFGQR TSIYRGVTRH RWTGRYEAHL
301: WDNSCRREGQ TRKGRQVYLG GYDKEEKAAR AYDLAALKYW GPTTTTNFPV NNYEKELEEM KHMTRQEFVA SLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDMSRYDVK SILDSAALPV GTAAKRLKDA EAAAAYDVGR IASHLGGDGA YAAHYGHHHH
501: SAAAAWPTIA FQAAAAPPPH AAGLYHPYAQ PLRGWCKQEQ DHAVIAAAHS LQDLHHLNLG AAAAAHDFFS QAMQQQHGLG SIDNASLEHS TGSNSVVYNG
601: DNGGGGGGYI MAPMSAVSAT ATAVASSHDH GGDGGKQVQM GYDSYLVGAD AYGGGGAGRM PSWAMTPASA PAATSSSDMT GVCHGAQLFS VWNDT

Best Arabidopsis Sequence Match ( AT3G20840.1 )
(BLAST)

001: MNSNNWLGFP LSPNNSSLPP HEYNLGLVSD HMDNPFQTQE WNMINPHGGG GDEGGEVPKV ADFLGVSKPD ENQSNHLVAY NDSDYYFHTN SLMPSVQSND
101: VVVAACDSNT PNNSSYHELQ ESAHNLQSLT LSMGTTAGNN VVDKASPSET TGDNASGGAL AVVETATPRR ALDTFGQRTS IYRGVTRHRW TGRYEAHLWD
201: NSCRREGQSR KGRQVYLGGY DKEDKAARSY DLAALKYWGP STTTNFPITN YEKEVEEMKH MTRQEFVAAI RRKSSGFSRG ASMYRGVTRH HQHGRWQARI
301: GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF EINRYDVKAI LESSTLPIGG GAAKRLKEAQ ALESSRKREA EMIALGSSFQ YGGGSSTGSG
401: STSSRLQLQP YPLSIQQPLE PFLSLQNNDI SHYNNNNAHD SSSFNHHSYI QTQLHLHQQT NNYLQQQSSQ NSQQLYNAYL HSNPALLHGL VSTSIVDNNN
501: NNGGSSGSYN TAAFLGNHGI GIGSSSTVGS TEEFPTVKTD YDMPSSDGTG GYSGWTSESV QGSNPGGVFT MWNE

Arabidopsis Description

PLT1AP2-like ethylene-responsive transcription factor PLT1 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.