Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G389100.1 | Wheat | nucleus | 98.4 | 98.53 |
| TraesCS3A01G395500.1 | Wheat | nucleus | 90.39 | 96.44 |
| HORVU3Hr1G089160.2 | Barley | nucleus | 83.58 | 94.85 |
| Os01t0899800-01 | Rice | nucleus | 64.09 | 69.06 |
| KXG33917 | Sorghum | nucleus | 62.22 | 66.29 |
| Zm00001d042492_P001 | Maize | nucleus | 61.01 | 64.73 |
| GSMUA_Achr5P25620_001 | Banana | nucleus | 37.25 | 51.29 |
| GSMUA_Achr8P09110_001 | Banana | nucleus | 39.52 | 49.83 |
| TraesCS7B01G401400.1 | Wheat | nucleus | 28.7 | 46.04 |
| TraesCS4B01G180600.1 | Wheat | nucleus | 22.7 | 45.33 |
| TraesCS2B01G534000.1 | Wheat | nucleus | 27.64 | 42.86 |
| TraesCS6B01G252000.1 | Wheat | nucleus | 37.52 | 42.45 |
| TraesCS2B01G378100.1 | Wheat | nucleus | 37.38 | 42.42 |
| TraesCS4B01G292900.1 | Wheat | nucleus | 28.57 | 40.53 |
| TraesCS6B01G153800.1 | Wheat | nucleus | 16.56 | 36.8 |
| TraesCS2B01G268100.2 | Wheat | nucleus | 28.57 | 35.67 |
| TraesCS5B01G220400.2 | Wheat | nucleus | 18.83 | 35.52 |
| TraesCS4B01G235900.2 | Wheat | nucleus | 29.37 | 34.81 |
| TraesCS4B01G136400.1 | Wheat | plastid | 15.22 | 34.55 |
| TraesCS5B01G410200.1 | Wheat | nucleus | 28.17 | 33.6 |
| TraesCS3B01G368400.1 | Wheat | plastid | 16.15 | 31.43 |
Protein Annotations
| MapMan:15.5.7.3 | Gene3D:3.30.730.10 | InterPro:AP2-like_transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR32467 |
| PANTHER:PTHR32467:SF42 | SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS3B01G427300 | EnsemblPlants:TraesCS3B01G427300.1 | TIGR:cd00018 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:666441927..666447753
Molecular Weight (calculated)
78662.2 Da
IEP (calculated)
7.564
GRAVY (calculated)
-0.422
Length
749 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDPMRGLGF RSRVSLCVSG EDRRQGFSMA GRRGSVSSSR VQVASSMATV NNWLGFSLSP QELPPSAAAS GDVSGADVCY NIPQDWNMRG SELSALVAEP
101: KLEDFLGGIS YSDHHHHQHK QPGGNNMVVP AGSASGGAAC YANSGGSSVG YLYHPSSASL QFADSVMVAS SGGGVHHDGA GIMANTTANG DLNGGGGGGI
201: GLSMIKSWLR SQPSPAQAQP PEQQRAEAAA QGLSLSMNMA ACIPPLVGGE RGVPELAIVR KDDTAGGSSA GSGAVVSAGA DSTGGSSGAV VETPASRKTA
301: DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS CRREGQTRKG RQVYLGGYDK EEKAARAYDL AALKYWGATT TTNFPVNNYE KELDEMKHMT RQEFVASLRR
401: KSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR GLNAVTNFDM TRYDVKSILD STALPIGSAA KRLKDKEAAT
501: ASSLALQQQQ HAGVVSGYDM GALAAYGAAY HHHHPSVAGA VAWPTIAFQT PPQQVSGGGG GHMYHPYAHA QPLRGWCKQE PDHAVIAAAH SLQELHHLNL
601: GAGGGAHDFF SQHAQAMQQQ HGGLGSIDNG AGASLEHSTG SNSVVYNNGA VESYMLPMST TTTAAVSHAH EQAAAHAHAR AVAAQAYSGG NMSRDHDDGK
701: IAYENYLVST AEAYGGGRMA AWAPASAPPA TSSSDMTGTQ LFSVWNDTN
101: KLEDFLGGIS YSDHHHHQHK QPGGNNMVVP AGSASGGAAC YANSGGSSVG YLYHPSSASL QFADSVMVAS SGGGVHHDGA GIMANTTANG DLNGGGGGGI
201: GLSMIKSWLR SQPSPAQAQP PEQQRAEAAA QGLSLSMNMA ACIPPLVGGE RGVPELAIVR KDDTAGGSSA GSGAVVSAGA DSTGGSSGAV VETPASRKTA
301: DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS CRREGQTRKG RQVYLGGYDK EEKAARAYDL AALKYWGATT TTNFPVNNYE KELDEMKHMT RQEFVASLRR
401: KSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR GLNAVTNFDM TRYDVKSILD STALPIGSAA KRLKDKEAAT
501: ASSLALQQQQ HAGVVSGYDM GALAAYGAAY HHHHPSVAGA VAWPTIAFQT PPQQVSGGGG GHMYHPYAHA QPLRGWCKQE PDHAVIAAAH SLQELHHLNL
601: GAGGGAHDFF SQHAQAMQQQ HGGLGSIDNG AGASLEHSTG SNSVVYNNGA VESYMLPMST TTTAAVSHAH EQAAAHAHAR AVAAQAYSGG NMSRDHDDGK
701: IAYENYLVST AEAYGGGRMA AWAPASAPPA TSSSDMTGTQ LFSVWNDTN
001: MNSNNWLGFP LSPNNSSLPP HEYNLGLVSD HMDNPFQTQE WNMINPHGGG GDEGGEVPKV ADFLGVSKPD ENQSNHLVAY NDSDYYFHTN SLMPSVQSND
101: VVVAACDSNT PNNSSYHELQ ESAHNLQSLT LSMGTTAGNN VVDKASPSET TGDNASGGAL AVVETATPRR ALDTFGQRTS IYRGVTRHRW TGRYEAHLWD
201: NSCRREGQSR KGRQVYLGGY DKEDKAARSY DLAALKYWGP STTTNFPITN YEKEVEEMKH MTRQEFVAAI RRKSSGFSRG ASMYRGVTRH HQHGRWQARI
301: GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF EINRYDVKAI LESSTLPIGG GAAKRLKEAQ ALESSRKREA EMIALGSSFQ YGGGSSTGSG
401: STSSRLQLQP YPLSIQQPLE PFLSLQNNDI SHYNNNNAHD SSSFNHHSYI QTQLHLHQQT NNYLQQQSSQ NSQQLYNAYL HSNPALLHGL VSTSIVDNNN
501: NNGGSSGSYN TAAFLGNHGI GIGSSSTVGS TEEFPTVKTD YDMPSSDGTG GYSGWTSESV QGSNPGGVFT MWNE
101: VVVAACDSNT PNNSSYHELQ ESAHNLQSLT LSMGTTAGNN VVDKASPSET TGDNASGGAL AVVETATPRR ALDTFGQRTS IYRGVTRHRW TGRYEAHLWD
201: NSCRREGQSR KGRQVYLGGY DKEDKAARSY DLAALKYWGP STTTNFPITN YEKEVEEMKH MTRQEFVAAI RRKSSGFSRG ASMYRGVTRH HQHGRWQARI
301: GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF EINRYDVKAI LESSTLPIGG GAAKRLKEAQ ALESSRKREA EMIALGSSFQ YGGGSSTGSG
401: STSSRLQLQP YPLSIQQPLE PFLSLQNNDI SHYNNNNAHD SSSFNHHSYI QTQLHLHQQT NNYLQQQSSQ NSQQLYNAYL HSNPALLHGL VSTSIVDNNN
501: NNGGSSGSYN TAAFLGNHGI GIGSSSTVGS TEEFPTVKTD YDMPSSDGTG GYSGWTSESV QGSNPGGVFT MWNE
Arabidopsis Description
PLT1AP2-like ethylene-responsive transcription factor PLT1 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.