CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042492_P001	Maize	nucleus	92.18	91.78
Os01t0899800-01	Rice	nucleus	73.97	74.82
HORVU3Hr1G089160.2	Barley	nucleus	62.45	66.52
TraesCS3A01G395500.1	Wheat	nucleus	66.15	66.24
TraesCS3D01G389100.1	Wheat	nucleus	66.71	62.7
TraesCS3B01G427300.1	Wheat	nucleus, plastid	66.29	62.22
GSMUA_Achr5P25620_001	Banana	nucleus	39.97	51.65
GSMUA_Achr8P09110_001	Banana	nucleus	42.67	50.51
EER88761	Sorghum	nucleus	31.72	47.05
KXG27285	Sorghum	nucleus	30.3	43.65
KXG30667	Sorghum	nucleus	41.54	42.32
KXG39508	Sorghum	extracellular, nucleus	24.61	40.52
OQU93137	Sorghum	nucleus	30.16	37.13
KXG39831	Sorghum	nucleus	31.72	36.14
OQU89519	Sorghum	plastid	19.49	34.68
EER93382	Sorghum	nucleus	30.58	33.18
KXG34322	Sorghum	nucleus	31.29	32.31
EES09182	Sorghum	nucleus	19.06	31.9
OQU80549	Sorghum	nucleus	19.77	31.59
EES19874	Sorghum	nucleus	19.77	31.38
KXG33588	Sorghum	plastid	17.21	30.33
EER89186	Sorghum	nucleus	19.2	27.66

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1B6Q7P1	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KXG33917	ProteinID:KXG33917	ProteinID:KXG33917.1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF42	SMART:SM00380	EnsemblPlantsGene:SORBI_3003G390600
SUPFAM:SSF54171	UniParc:UPI00022A38C7	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:70152308..70156589

Molecular Weight (calculated)

73553.1 Da

IEP (calculated)

6.799

GRAVY (calculated)

-0.340

Length

703 amino acids

Sequence
(BLAST)

001: MATVNNWLAF SLSPQELPPT QTDSTLISAA TTDDVSGDVC FNIPQDWSMR GSELSALVAE PKLEDFLGGI SFSEQHHKAN CNMIPSTSST ACYASSGATA
101: GYHHQLYHQP TSSALHFADS VMVASSAGGV HDGGAMLSAA SANGSAGAGA ASANGSGSIG LSMIKNWLRS QPAPMQPRVA AAESVQGLSL SMNMAGATQG
201: AAGMPLLAGE RGRAPESVST SAQGGAVVTA PKEDSGGSGV AATGALVAVS TDTGGSGASA DNTARKTVDT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR
301: REGQTRKGRQ VYLGGYDKEE KAARAYDLAA LKYWGPTTTT NFPVNNYEKE LEDMKHMTRQ EFVASLRRKS SGFSRGASIY RGVTRHHQHG RWQARIGRVA
401: GNKDLYLGTF STQEEAAEAY DIAAIKFRGL NAVTNFDMSR YDVKSILDSS ALPIGSAAKR LKEAEAAASA QHHAGVVSYD VGRIASQLGD GGALAAAYGA
501: HYHGAWPTIA FQPSAATGLY HPYAQPMRGW CKQEQDHAVI AAAHSLQELH HLNLGAAAGA HDFFSAGQQA AMHGLGSMDN ASLEHSTGSN SVVYNGVGDS
601: NGSTVVGSGG YMMPMSAATA TATTAMVSHE QVHARAQGDH HDEAKQAAQM GYESYLVNAE NYGGGRMSAA WATVSAPPAA SSNDNMADVG HGGAQLFSVW
701: NDT

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.