CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011134_P001	Maize	nucleus	85.33	90.0
Os05t0536250-00	Rice	nucleus	70.88	72.85
HORVU1Hr1G080350.3	Barley	nucleus	64.56	70.62
TraesCS1D01G362500.1	Wheat	nucleus	64.33	69.34
TraesCS1A01G357800.1	Wheat	nucleus	64.56	69.25
KRH01131	Soybean	nucleus	45.37	51.28
VIT_14s0108g00050.t01	Wine grape	nucleus	46.5	50.99
KRH40131	Soybean	nucleus	44.47	50.26
Solyc06g066390.1.1	Tomato	nucleus	44.02	48.15
PGSC0003DMT400006170	Potato	nucleus	42.44	46.31
OQU89519	Sorghum	plastid	38.37	43.04
Solyc08g076380.1.1	Tomato	nucleus	42.21	42.99
EER89186	Sorghum	nucleus	46.28	42.01
EES09182	Sorghum	nucleus	34.09	35.95
KXG33588	Sorghum	plastid	31.15	34.59
OQU80549	Sorghum	nucleus	34.31	34.55
EER88761	Sorghum	nucleus	30.7	28.69
KXG39508	Sorghum	extracellular, nucleus	27.09	28.1
KXG27285	Sorghum	nucleus	30.93	28.07
OQU93137	Sorghum	nucleus	29.35	22.77
EER93382	Sorghum	nucleus	31.83	21.76
KXG39831	Sorghum	nucleus	29.12	20.91
KXG34322	Sorghum	nucleus	32.05	20.85
KXG30667	Sorghum	nucleus	31.15	20.0
KXG33917	Sorghum	nucleus	31.38	19.77

Protein Annotations

MapMan:15.5.7.3	MapMan:26.9.2.2	Gene3D:3.30.730.10	EntrezGene:8061065	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	UniProt:C5YUI8	InterPro:DNA-bd_dom_sf	EnsemblPlants:EES19874	ProteinID:EES19874	ProteinID:EES19874.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF10	SMART:SM00380
EnsemblPlantsGene:SORBI_3009G212500	SUPFAM:SSF54171	UniParc:UPI0001A89171	RefSeq:XP_002441444.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:55811806..55814163

Molecular Weight (calculated)

47871.1 Da

IEP (calculated)

8.416

GRAVY (calculated)

-0.556

Length

443 amino acids

Sequence
(BLAST)

001: MESSGMMMVK SEIESCGYPG PSSSTAPAAG VVIGGSATTE RGEGGHHHHH HQVVVRRRRR EPPLLAPIAG GGIGKPLPSI TVKRSSRFRG VSRHRWTGRF
101: EAHLWDKNSW NPTQRKKGKQ VYLGAYDEEE AAARAYDLAA LKYWGPTTYT NFPVMDYEKE LKIMENLTKE EYLASLRRKS SGFSRGVSKY RGVARHHQNG
201: RWEARIGRVF GNKYLYLGTY STQEEAARAY DIAAIEYKGV NAVTNFDLRS YITWLKPSGA PAAFNPEAAL LMQAAPAEQL LHPAETAQML PRVGNPFLLD
301: HGAAPPGSSG GGGQDASMSS MVSPGAGGGM RRRGSSTALS LLLKSSMFRQ LVEKNSDAEE GVRDREDAAA AAAAAHPAGP GDAYEYHNFF QGEAPPDMCD
401: LFSSGGGGDH ARNAGFHGEI AACYDDGEGL DGWNGFGNMS SLQ

Best Arabidopsis Sequence Match ( AT3G54320.3 )
(BLAST)

001: MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY
101: LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT
201: QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI
301: VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP
401: SSSSPLSCLS TDSASSTTTT TTSVSCNYLV

Arabidopsis Description

WRI1Integrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT3G54320]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.