CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 5
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048004_P001	Maize	nucleus	88.33	82.83
Os03t0232200-01	Rice	nucleus	76.01	73.05
TraesCS4A01G060400.1	Wheat	nucleus	72.77	71.61
TraesCS4B01G235900.2	Wheat	nucleus	72.45	70.73
TraesCS4D01G237300.2	Wheat	nucleus	72.29	70.68
HORVU4Hr1G065990.2	Barley	nucleus	71.96	70.03
KXG34322	Sorghum	nucleus	51.05	46.26
EER93382	Sorghum	nucleus	44.41	42.28
KXG27285	Sorghum	nucleus	30.47	38.52
EER88761	Sorghum	nucleus	29.34	38.19
KXG39508	Sorghum	extracellular, nucleus	25.93	37.47
OQU93137	Sorghum	nucleus	33.06	35.73
EES09182	Sorghum	nucleus	21.88	32.14
KXG33917	Sorghum	nucleus	36.14	31.72
OQU89519	Sorghum	plastid	20.26	31.65
KXG30667	Sorghum	nucleus	34.85	31.16
KXG33588	Sorghum	plastid	19.45	30.08
OQU80549	Sorghum	nucleus	21.23	29.77
EES19874	Sorghum	nucleus	20.91	29.12
EER89186	Sorghum	nucleus	21.39	27.05

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1B6QPI4	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KXG39831	ProteinID:KXG39831	ProteinID:KXG39831.1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF44	SMART:SM00380	EnsemblPlantsGene:SORBI_3001G448000
SUPFAM:SSF54171	UniParc:UPI00081AE41D	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:72530577..72535005

Molecular Weight (calculated)

66745.0 Da

IEP (calculated)

7.411

GRAVY (calculated)

-0.543

Length

617 amino acids

Sequence
(BLAST)

001: MASGSNWLGF SLSPQTAVEV PSASEPAPAH HAPPDPSSTM ISSSSTNNAT TSNFLFSPMA APYPGYYCVG GAYGDGTSAA GVYYSHLPAM PIKSDGTLCN
101: IEGMMPSSPP KLEDFLGGGN GGGQETATYY SHGQEEGASR DYRQYQHHQL VPYNFQHLTE AEMLQEDAAP MEEAMAAAKN FLLTSYGACY SNGEMHPLSL
201: SMMSPGSQSS SCVGAAPQQQ LAAVATASAA AAAQGRSNGD GEQCVGRKRG TGKGGHKQQP VHRKSIDTFG QRTSRYRGVT RHRWTGRYEA HLWDNSCRKD
301: GQTRKGRQVY LGGYDTEDKA ARAYDLAALK YWGPATHINF PVENYRDELE VMKGMTRQEY VAHLRRRSSG FSRGASIYRG VTRHHQQGRW QSRIGRVAGN
401: KDLYLGTFTT QEEAAEAYDI AAIKFRGLNA VTNFDITRYD VDKIMESNTL LPAEEARKVK AIEAANNAPM MQHNGGRELN PAEETSAAWR MVLHGSPQEA
501: VHCPEAVDLQ RAIMSNDSQH PSLHGIVGLD HHLGVPGKTS GSINFSNSSS QVTSLGNSRE GSPERLGLAM LYGKQPSAVS LATMSPWMPM AAQTVAQVLK
601: QPNVVSHLPV FAAWADA

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.