CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0653600-01	Rice	nucleus	77.05	75.96
TraesCS2D01G506500.1	Wheat	nucleus	72.34	74.16
TraesCS2A01G505600.1	Wheat	nucleus	72.34	73.85
TraesCS2B01G534000.1	Wheat	nucleus	72.13	72.88
GSMUA_AchrUn_...	Banana	nucleus	38.52	47.47
EER88761	Sorghum	nucleus	45.7	47.05
KXG39508	Sorghum	extracellular, nucleus	33.61	38.41
OQU93137	Sorghum	nucleus	43.24	36.95
OQU89519	Sorghum	plastid	25.61	31.65
Zm00001d002025_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, nucleus	45.9	31.46
EES19874	Sorghum	nucleus	28.07	30.93
EES09182	Sorghum	nucleus	26.43	30.71
KXG39831	Sorghum	nucleus	38.52	30.47
KXG33917	Sorghum	nucleus	43.65	30.3
OQU80549	Sorghum	nucleus	26.43	29.32
KXG30667	Sorghum	nucleus	40.98	28.99
KXG34322	Sorghum	nucleus	39.96	28.63
EER93382	Sorghum	nucleus	37.91	28.55
KXG33588	Sorghum	plastid	22.95	28.07
EER89186	Sorghum	nucleus	25.41	25.41

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1B6PNN9	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KXG27285	ProteinID:KXG27285	ProteinID:KXG27285.1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF25	SMART:SM00380	EnsemblPlantsGene:SORBI_3006G245500
SUPFAM:SSF54171	UniParc:UPI00081AB477	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:58511644..58516401

Molecular Weight (calculated)

52590.9 Da

IEP (calculated)

6.327

GRAVY (calculated)

-0.514

Length

488 amino acids

Sequence
(BLAST)

001: MDTSHHYPWL NFSLAHHGDL EEEERGAAAE LAAIAGAAPP PKLEDFLGGG VINGESARSG GGVPVAAPEV SAPAEMYDSD LKFIAAAGFL GGGSAAGPVA
101: TSPLSSLDQA DPKLALPAAA AAAPAPEQRK AVDSFGQRTS IYRGVTRHRW TGRYEAHLWD NSCRREGQSR KGRQVYLGGY DKEEKAARAY DLAALKYWGS
201: STTTNFPVAE YEKELEEMKT MTRQEFVASL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF
301: EISRYNVESI MNSNIPMGSM SAGGRSNKAL ESPPSGSPDA MPVEASTAPL FAALPVKYDQ QQQDYLSMLA LQHHQQGNLQ GLGFGLYSSG VNLDFANSHS
401: TASSMTHCYV NGGTVSSHEQ HQHHQQLQDH QQQGESETQQ SSNSCSSLPF ATPIAFNGSY ESSMTAAGPF GYSYPNVAAF QTPIYGME

Best Arabidopsis Sequence Match ( AT5G57390.1 )
(BLAST)

001: MKNNNNKSSS SSSYDSSLSP SSSSSSHQNW LSFSLSNNNN NFNSSSNPNL TSSTSDHHHP HPSHLSLFQA FSTSPVERQD GSPGVSPSDA TAVLSVYPGG
101: PKLENFLGGG ASTTTTRPMQ QVQSLGGVVF SSDLQPPLHP PSAAEIYDSE LKSIAASFLG NYSGGHSSEV SSVHKQQPNP LAVSEASPTP KKNVESFGQR
201: TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEDKAAR AYDLAALKYW GPTTTTNFPI SNYESELEEM KHMTRQEFVA SLRRKSSGFS
301: RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDISRYDVK SIASCNLPVG GLMPKPSPAT AAADKTVDLS
401: PSDSPSLTTP SLTFNVATPV NDHGGTFYHT GIPIKPDPAD HYWSNIFGFQ ANPKAEMRPL ANFGSDLHNP SPGYAIMPVM QEGENNFGGS FVGSDGYNNH
501: SAASNPVSAI PLSSTTTMSN GNEGYGGNIN WINNNISSSY QTAKSNLSVL HTPVFGLE

Arabidopsis Description

AIL5AP2-like ethylene-responsive transcription factor AIL5 [Source:UniProtKB/Swiss-Prot;Acc:Q6PQQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.