Factsheet for Zm00001d002025_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, nucleus

Predictor Summary:

mitochondrion 3
golgi 1
endoplasmic reticulum 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27285	Sorghum	nucleus	31.46	45.9
TraesCS2A01G505600.1	Wheat	nucleus	28.93	43.1
TraesCS2D01G506500.1	Wheat	nucleus	28.79	43.07
Os04t0653600-01	Rice	nucleus	29.63	42.63
TraesCS2B01G534000.1	Wheat	nucleus	28.65	42.24
GSMUA_AchrUn_...	Banana	nucleus	23.31	41.92
Zm00001d046913_P001	Maize	nucleus	25.84	37.94
Zm00001d028919_P001	Maize	extracellular, nucleus	22.05	36.94
Zm00001d005016_P005	Maize	plastid	17.98	32.16
Zm00001d011134_P001	Maize	nucleus	18.68	31.67
Zm00001d027878_P002	Maize	nucleus	23.88	31.48
Zm00001d020540_P002	Maize	plastid	18.12	31.39
Zm00001d018731_P001	Maize	nucleus	26.69	31.0
Zm00001d017207_P001	Maize	nucleus	29.07	30.62
Zm00001d007840_P001	Maize	nucleus	25.7	30.5
Zm00001d032144_P001	Maize	nucleus	17.28	30.37
Zm00001d042492_P001	Maize	nucleus	28.51	28.75
Zm00001d034204_P001	Maize	nucleus	26.69	28.4
Zm00001d048004_P001	Maize	nucleus	25.42	27.51
Zm00001d045378_P001	Maize	nucleus	17.84	25.87
Zm00001d043116_P002	Maize	nucleus	16.43	25.32
Zm00001d052405_P002	Maize	plastid	15.17	24.83

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1D6DVQ8	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONM12807.1	PFAM:PF00847	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF25	SMART:SM00380	SUPFAM:SSF54171	TMHMM:TMhelix	UniParc:UPI0008458E8A	EnsemblPlantsGene:Zm00001d002025
EnsemblPlants:Zm00001d002025_P001	EnsemblPlants:Zm00001d002025_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 24AP2-like ethylene-responsive transcription factor AIL5

Coordinates

chr2:+:4628845..4634985

Molecular Weight (calculated)

76712.7 Da

IEP (calculated)

8.200

GRAVY (calculated)

-0.485

Length

712 amino acids

Sequence
(BLAST)

001: MWAERVVGER RMRQIQRFAR NAKLTVVCLL LTVVVLRGTI GAGRFGTPQQ VLIELRQHFV SHPHRALAEH HDARSRASTT TTSSSSSSGR RDEPDPPPRS
101: LRDPPYTLGP KISDWDEQRA AWHRRHPETP PFLNDIKPRV LRDGPAHLPR PTAERGISPL FPDPRELGRT NPPPTPAGRE SHEVTARVRR RFPFSPHVVV
201: MDTSHHYHPW LNFSLAHHCD LEEEERGAAA ELAAIAGAAP PPKLEDFLGG GVATGGPEAV APAEMYDSDL KFIAAAGFLG GSAAAAATSP LSSLDQAGSK
301: LALPAAAAAP APEQRKAVDS FGQRTSIYRG VTRTKQVFGD CTGGLAGTRH ICGTTAADAK GRAARAAKKH HIADGTIFFH ESEGGYDKEE KAARAYDLAA
401: LKYWGSSTTT NFPVAEYEKE VEEMKNMTRQ EFVASLRRKS SGFSRGASIY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STEEEAAEAY DIAAIKFRGL
501: NAVTNFEISR YNVETIMSSN LPVASMSSSA AAAAGGRSSK ALESPPSGSL DGGGGMPVVE ASTAPPLFIP VKYDQQQQEY LSMLALQQHH QQQQAGNLLQ
601: GPLVGFGGLY SSGVNLDFAN SHGTAAPSSM AHHCYANGTA SASHEHQHQM QQGGENETQP QPQQSSSSCS SLPFATPVAF NGSYESSITA AGPFGYSYPN
701: VAAFQTPIYG ME

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.