Factsheet for TraesCS2A01G505600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G506500.1	Wheat	nucleus	96.44	96.85
TraesCS2B01G534000.1	Wheat	nucleus	97.28	96.27
Os04t0653600-01	Rice	nucleus	78.45	75.76
KXG27285	Sorghum	nucleus	73.85	72.34
TraesCS7A01G495800.1	Wheat	nucleus	47.28	48.19
GSMUA_AchrUn_...	Banana	nucleus	38.91	46.97
TraesCS4A01G123800.1	Wheat	nucleus	34.1	43.12
TraesCS4A01G011600.1	Wheat	nucleus	42.47	38.45
TraesCS1A01G357800.1	Wheat	nucleus	28.24	32.69
TraesCS5A01G221600.1	Wheat	nucleus	26.78	32.32
TraesCS2A01G267600.2	Wheat	nucleus	39.12	31.11
TraesCS7A01G095100.1	Wheat	nucleus	26.15	30.64
TraesCS4A01G395400.1	Wheat	nucleus	26.15	30.56
TraesCS6A01G125700.1	Wheat	nucleus	22.18	30.37
TraesCS3A01G395500.1	Wheat	nucleus	43.93	29.91
TraesCS5A01G141700.1	Wheat	plastid	26.78	29.91
TraesCS5A01G405400.1	Wheat	nucleus	38.91	29.57
TraesCS6A01G229500.1	Wheat	nucleus	40.38	29.29
TraesCS4A01G060400.1	Wheat	nucleus	38.28	29.19
Zm00001d002025_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, nucleus	43.1	28.93
TraesCS4A01G181300.1	Wheat	plastid	21.76	28.81

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF25	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS2A01G505600	EnsemblPlants:TraesCS2A01G505600.1	TIGR:cd00018
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:733854526..733858190

Molecular Weight (calculated)

51789.9 Da

IEP (calculated)

6.200

GRAVY (calculated)

-0.618

Length

478 amino acids

Sequence
(BLAST)

001: MDMDAAHGHY PWLNFSLAHH CEMEEEERGA AAELAAIAGA GPPPKLEDFL GGGANGRNNN DAGRGDQVVS AATAEMYDSE LKFLAAGFLS GASGTTAPTI
101: SPAAAPQEQA DPKMTAPTPE QKKAVDSFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QSRKGRQVYL GGYDKEEKAA RAYDLAALKY WGSSTTTNFP
201: VADYEKEVEE MKHMTRQEFV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTE EEAAEAYDIA AIKFRGLNAV TNFEIGRYNV
301: ESIISSNLPI GNMSGGAGRG SKALESSSPE AAPLPVEAPH SLAFTALPMK YDQQQQDYLS FLALQHHQQG NLQGLGYGLY SSGVNLDFAN AGPGGAMAPH
401: CYGSNGVDLH LQQHDHQQEQ EGEGQQQQHD QHQSMGFGAS TPMAAFSSGG PYESSVTAGS FGYYPNVAAF QTPIFGME

Best Arabidopsis Sequence Match ( AT5G57390.1 )
(BLAST)

001: MKNNNNKSSS SSSYDSSLSP SSSSSSHQNW LSFSLSNNNN NFNSSSNPNL TSSTSDHHHP HPSHLSLFQA FSTSPVERQD GSPGVSPSDA TAVLSVYPGG
101: PKLENFLGGG ASTTTTRPMQ QVQSLGGVVF SSDLQPPLHP PSAAEIYDSE LKSIAASFLG NYSGGHSSEV SSVHKQQPNP LAVSEASPTP KKNVESFGQR
201: TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEDKAAR AYDLAALKYW GPTTTTNFPI SNYESELEEM KHMTRQEFVA SLRRKSSGFS
301: RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDISRYDVK SIASCNLPVG GLMPKPSPAT AAADKTVDLS
401: PSDSPSLTTP SLTFNVATPV NDHGGTFYHT GIPIKPDPAD HYWSNIFGFQ ANPKAEMRPL ANFGSDLHNP SPGYAIMPVM QEGENNFGGS FVGSDGYNNH
501: SAASNPVSAI PLSSTTTMSN GNEGYGGNIN WINNNISSSY QTAKSNLSVL HTPVFGLE

Arabidopsis Description

AIL5AP2-like ethylene-responsive transcription factor AIL5 [Source:UniProtKB/Swiss-Prot;Acc:Q6PQQ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.