Factsheet for TraesCS2A01G267600.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G268100.2	Wheat	nucleus	98.34	98.5
TraesCS2D01G256600.2	Wheat	nucleus	97.5	97.67
Zm00001d007840_P001	Maize	nucleus	68.22	68.33
GSMUA_Achr4P32280_001	Banana	nucleus	45.26	64.3
PGSC0003DMT400055210	Potato	nucleus	28.45	59.79
CDX72655	Canola	endoplasmic reticulum, golgi	32.78	58.98
GSMUA_Achr7P00740_001	Banana	nucleus	48.09	53.42
TraesCS5A01G405400.1	Wheat	nucleus	54.41	51.99
VIT_18s0001g08610.t01	Wine grape	nucleus	55.07	49.11
TraesCS4A01G060400.1	Wheat	nucleus	50.42	48.33
PGSC0003DMT400012588	Potato	nucleus	52.08	47.93
Solyc04g077490.2.1	Tomato	nucleus	51.75	47.7
CDX75673	Canola	nucleus	43.43	47.63
KRH15454	Soybean	nucleus	47.25	47.41
CDX69324	Canola	nucleus	43.43	47.03
AT4G37750.1	Thale cress	nucleus	43.43	47.03
Bra011782.1-P	Field mustard	nucleus	42.6	46.97
Solyc02g092050.2.1	Tomato	nucleus	49.92	46.44
Bra017852.1-P	Field mustard	nucleus	42.6	46.04
KRH52140	Soybean	nucleus	50.25	45.76
VIT_07s0151g00440.t01	Wine grape	nucleus	51.58	45.72
CDY44027	Canola	nucleus	42.43	45.62
KRG88628	Soybean	nucleus	36.77	45.57
CDY50260	Canola	nucleus	42.1	45.18
Bra010610.1-P	Field mustard	nucleus	41.43	45.03
KRH61449	Soybean	nucleus	49.58	44.95
KRH28322	Soybean	nucleus	45.26	44.44
KRH77164	Soybean	nucleus	45.42	44.39
KRH58159	Soybean	nucleus	48.59	43.91
KRH04380	Soybean	nucleus	48.75	42.84
TraesCS4A01G123800.1	Wheat	nucleus	26.79	42.59
TraesCS4A01G011600.1	Wheat	nucleus	34.94	39.77
TraesCS2A01G505600.1	Wheat	nucleus	31.11	39.12
TraesCS7A01G495800.1	Wheat	nucleus	30.12	38.59
TraesCS5A01G221600.1	Wheat	nucleus	23.29	35.35
CDY71263	Canola	nucleus	18.97	34.97
TraesCS1A01G357800.1	Wheat	nucleus	23.29	33.9
TraesCS6A01G125700.1	Wheat	nucleus	18.97	32.66
TraesCS7A01G095100.1	Wheat	nucleus	22.13	32.6
TraesCS5A01G141700.1	Wheat	plastid	23.13	32.48
TraesCS6A01G229500.1	Wheat	nucleus	35.61	32.47
TraesCS4A01G395400.1	Wheat	nucleus	21.96	32.27
TraesCS4A01G181300.1	Wheat	plastid	18.47	30.75
TraesCS3A01G395500.1	Wheat	nucleus	35.77	30.63

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS2A01G267600	EnsemblPlants:TraesCS2A01G267600.2	TIGR:cd00018
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:428908253..428911600

Molecular Weight (calculated)

63915.2 Da

IEP (calculated)

7.495

GRAVY (calculated)

-0.526

Length

601 amino acids

Sequence
(BLAST)

001: MTNNNGNGNG GSNAAASGWL GFSLSPHMDE HNHVQQQQQQ HQGLFYPSSV AAAYSLGSDV ATGGYYSQLA SMPLKSDGSL CIMEALRRTD QQDHHGPKLE
101: DFLGAGQPAM ALSLDNTSNF YYYSGGGGAG GQHGQSHGGG FLQQAYDVYG GPATASVLAA DEDAAAATAM ANWVQVARGA TAYATAENVL SAAADRQQHL
201: HHHPLALSMS SAGSLSSCVT AGAEYGGVVA TVDGGRKRGG ATAGQKQPVH HRKSIDTFGQ RTSQHRGVTR HRWTGRYEAH LWDNSCKKEG QTRKGRQVYL
301: GGYDMEEKAA RAYDQAALKY WGPSTHINFP LEDYQQELEE MKNMTRQEYV AHLRRKSSGF SRGASMYRGV TRHHQHGRWQ ARIGRVSGNK DLYLGTFGTQ
401: EEAAEAYDIA AIKFRGLNAV TNFDITRYDV DKIMASNTLL PGELARRNKD ANAAPLPLPA PDDCAASALV PVSTPGTDTG GSGQHRNQDV MSSGEAFSAL
501: HDLVTVDGHT AQGGNGARVH MSMSGASSLV TSLSNSREES PDRGGGLSML FAKPPQQPAT TTAASPKLMS TLAPLGSWAS SARPAAVSIA HMPMFAAWSD
601: A

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.