Factsheet for Solyc02g092050.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055210	Potato	nucleus	43.34	97.9
GSMUA_Achr8P26510_001	Banana	nucleus	33.9	64.79
VIT_07s0151g00440.t01	Wine grape	nucleus	64.86	61.8
CDX72655	Canola	endoplasmic reticulum, golgi	31.73	61.38
Os07t0124700-01	Rice	nucleus	28.79	56.19
GSMUA_Achr3P30690_001	Banana	nucleus	49.85	55.23
KRH28322	Soybean	nucleus	52.32	55.23
GSMUA_Achr3P15150_001	Banana	nucleus	46.44	54.45
CDX75673	Canola	nucleus	45.82	54.01
KRH77164	Soybean	nucleus	51.24	53.82
Solyc04g077490.2.1	Tomato	nucleus	54.18	53.68
Bra011782.1-P	Field mustard	nucleus	45.05	53.39
KRH58159	Soybean	nucleus	54.95	53.38
AT4G37750.1	Thale cress	nucleus	45.82	53.33
CDX69324	Canola	nucleus	45.36	52.79
KRH04380	Soybean	nucleus	55.88	52.78
GSMUA_Achr7P27500_001	Banana	nucleus	50.15	52.6
Bra017852.1-P	Field mustard	nucleus	44.58	51.8
CDY44027	Canola	nucleus	43.81	50.63
CDY50260	Canola	nucleus	43.81	50.54
Bra010610.1-P	Field mustard	nucleus	43.03	50.27
TraesCS2B01G268100.2	Wheat	nucleus	46.59	50.17
TraesCS2D01G256600.2	Wheat	nucleus	46.44	50.0
TraesCS2A01G267600.2	Wheat	nucleus	46.44	49.92
Zm00001d018731_P001	Maize	nucleus	45.51	47.96
TraesCS5D01G415500.1	Wheat	nucleus	45.82	47.28
Zm00001d007840_P001	Maize	nucleus	43.81	47.17
TraesCS5B01G410200.1	Wheat	nucleus	45.51	46.82
TraesCS5A01G405400.1	Wheat	nucleus	45.51	46.74
EER93382	Sorghum	nucleus	46.59	46.45
HORVU5Hr1G098450.2	Barley	nucleus	45.2	46.28
Zm00001d034204_P001	Maize	nucleus	46.75	45.14
KXG34322	Sorghum	nucleus	47.06	44.64
CDY71263	Canola	nucleus	21.67	42.94
Solyc07g018290.2.1	Tomato	nucleus	28.64	39.53
Solyc06g068570.2.1	Tomato	nucleus	18.89	38.73
Solyc05g051380.2.1	Tomato	nucleus	29.72	38.32
Solyc12g010490.1.1	Tomato	plastid	21.36	37.91
Solyc11g061750.1.1	Tomato	nucleus	32.04	37.77
Solyc11g010710.1.1	Tomato	nucleus	31.42	37.38
Solyc11g008560.1.1	Tomato	nucleus	38.39	36.63
Solyc03g117720.2.1	Tomato	nucleus, plastid	20.9	36.39
Solyc06g066390.1.1	Tomato	nucleus	20.9	33.33
Solyc01g096860.1.1	Tomato	nucleus	21.98	32.05
Solyc08g076380.1.1	Tomato	nucleus	20.59	30.57

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ncoils:Coil
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0010492	GO:GO:0019748	GO:GO:0019760	GO:GO:0042127	GO:GO:0043565	InterPro:IPR001471
InterPro:IPR036955	UniProt:K4BD02	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467
PANTHER:PTHR32467:SF47	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:Solyc02g092050.2	EnsemblPlants:Solyc02g092050.2.1	UniParc:UPI0002767D5A
SEG:seg	:	:	:	:	:

Description

AP2-like ethylene-responsive transcription factor ANT [Source:Projected from Arabidopsis thaliana (AT4G37750) UniProtKB/Swiss-Prot;Acc:Q38914]

Coordinates

chr2:-:53258502..53262032

Molecular Weight (calculated)

72006.3 Da

IEP (calculated)

7.110

GRAVY (calculated)

-0.806

Length

646 amino acids

Sequence
(BLAST)

001: MKSLGNDDNS SNNNNNNWLG FSLSPHINSL EGPLTDHHHS TQPGSSSDVQ SSVPIRFSPT HLNYPAMYYE GDNATLFSSL SAMPLKSDGS LCIMKGFNRS
101: QQPQGMISST PKLEDFFGDA AMGSHHYEGC NRGGMAHSLH NIYYNQHQDN ETSNSQDFLN HIQENTRHQQ QQQNYPDFSV FRGHEVYHST EQGKTECSNI
201: QVPTLTGDEM SGMNNWVSRN YQNQTGHALE QNMIGCMADN GAESGSVGAM TYGDFKSLSL SMSPGSQSSC VTGTQTQQIS PTLTDCIAIE TKKRGSEKAN
301: NQKQIVHRKS IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCKKEGQSRK GRQVYLGGYD MEDKAARSYD LAALKYWGPS THINFPLENY QQELEEMKNM
401: TRQEYVAHLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGVNAVTNFD ISRYDVERIM ASNTLLAGDL
501: ARRKKETETS KEICNQNLIA NASHQGEVNI QNKEENGNAV EWTMSLYQSS SPGMDTNSMS STMLQGQMDE SARINTHLSN DSSLVTSLGS SREVSPAKNN
601: GHLMHNFAMP QSAPKLIPSP ATNITSWISS AQLRPNVPVF AAWTDA

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.