CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018731_P001	Maize	nucleus	76.21	84.67
Os07t0124700-01	Rice	nucleus	36.86	75.83
GSMUA_Achr4P32280_001	Banana	nucleus	40.38	65.01
PGSC0003DMT400055210	Potato	nucleus	25.55	60.84
CDX72655	Canola	endoplasmic reticulum, golgi	28.78	58.68
GSMUA_Achr7P00740_001	Banana	nucleus	44.05	55.45
EER93382	Sorghum	nucleus	50.07	52.62
KXG39831	Sorghum	nucleus	46.26	51.05
VIT_18s0001g08610.t01	Wine grape	nucleus	49.05	49.55
CDX75673	Canola	nucleus	39.06	48.54
PGSC0003DMT400012588	Potato	nucleus	46.26	48.24
Solyc04g077490.2.1	Tomato	nucleus	45.96	48.01
Bra011782.1-P	Field mustard	nucleus	38.33	47.89
CDX69324	Canola	nucleus	38.91	47.75
KRH15454	Soybean	nucleus	41.85	47.58
Bra017852.1-P	Field mustard	nucleus	38.47	47.12
KRH52140	Soybean	nucleus	45.67	47.12
Solyc02g092050.2.1	Tomato	nucleus	44.64	47.06
AT4G37750.1	Thale cress	nucleus	38.33	47.03
VIT_07s0151g00440.t01	Wine grape	nucleus	46.7	46.9
KRH61449	Soybean	nucleus	45.52	46.76
CDY44027	Canola	nucleus	38.33	46.69
KRG88628	Soybean	nucleus	33.19	46.6
Bra010610.1-P	Field mustard	nucleus	37.44	46.11
CDY50260	Canola	nucleus	37.74	45.89
KRH77164	Soybean	nucleus	40.82	45.2
KRH28322	Soybean	nucleus	40.38	44.93
KRH58159	Soybean	nucleus	43.32	44.36
KRH04380	Soybean	nucleus	43.02	42.84
EER88761	Sorghum	nucleus	29.22	41.98
KXG27285	Sorghum	nucleus	28.63	39.96
KXG39508	Sorghum	extracellular, nucleus	24.52	39.11
OQU93137	Sorghum	nucleus	32.01	38.18
CDY71263	Canola	nucleus	17.03	35.58
EES09182	Sorghum	nucleus	20.56	33.33
OQU89519	Sorghum	plastid	19.24	33.16
KXG30667	Sorghum	nucleus	32.6	32.17
EES19874	Sorghum	nucleus	20.85	32.05
OQU80549	Sorghum	nucleus	20.56	31.82
KXG33917	Sorghum	nucleus	32.31	31.29
KXG33588	Sorghum	plastid	17.77	30.33
EER89186	Sorghum	nucleus	19.53	27.25

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1B6Q8S7	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ncoils:Coil	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KXG34322	ProteinID:KXG34322	ProteinID:KXG34322.1
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47	SMART:SM00380
EnsemblPlantsGene:SORBI_3002G022600	SUPFAM:SSF54171	UniParc:UPI00081AD8B9	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:2063078..2068725

Molecular Weight (calculated)

70647.6 Da

IEP (calculated)

7.380

GRAVY (calculated)

-0.376

Length

681 amino acids

Sequence
(BLAST)

001: MTNNNGNGTN AAASSWLGFS LSPHMASAMD EHHHVQQQQQ HHHHHSLFFP SVTAAAAAAY GLGGSDGGVA TSASPYYTPQ LASMPLKSDG SLCIMEALRR
101: SDQPDHHGPK LEDFLGAAAA QSQAMALSLQ DNPAAAASSF YYYGNGGGGG SGHQHHGGFL QPCADLYGGP SEASLVADDD EAAAAATAMA SWVAARAGES
201: GGVLSAAAAA AGHQHHHHAL ALSMSSGSLS SCVTAHPGAA AADYGVVAAT ASASLDGGRK RGGAAGQKQP VHHRKSIDTF GQRTSQYRGV TRHRWTGRYE
301: AHLWDNSCKK EGQTRKGRQV YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPLEDYQEEL EEMKNMTRQE YVAHLRRKSS GFSRGASMYR GVTRHHQHGR
401: WQARIGRVSG NKDLYLGTFS TQEEAAEAYD IAAIKFRGLN AVTNFDITRY DVDKIMASNT LLPGDLARRR KDDDPAAVIA GADASNGGGV TTAAAAAALV
501: QQAAAAAAAG AGGNHSASSS ETWIKVAAAA ALQAAGAAPR DGNHHHHHHD VLSGEAFSVL HDLVVTAADG GNGNGNGGHH HHHVHNSAAT AQHMSMSSAS
601: SLVTSLGNSR EGSPDRGGGL SMLFSKPPAP APAASAHAAN KPMSPLMPLG SWASTAAASA RAAAAAVSIA HMPVFAAWTD A

Best Arabidopsis Sequence Match ( AT4G37750.1 )
(BLAST)

001: MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL
101: NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS
201: MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL
301: WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA
401: RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL
501: LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA AWADS

Arabidopsis Description

ANTAP2-like ethylene-responsive transcription factor ANT [Source:UniProtKB/Swiss-Prot;Acc:Q38914]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.