CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028919_P001	Maize	extracellular, nucleus	88.29	88.71
HORVU4Hr1G052880.2	Barley	nucleus	32.32	64.79
TraesCS4B01G180600.1	Wheat	nucleus	55.74	63.47
TraesCS4D01G182100.1	Wheat	nucleus	55.5	63.03
TraesCS4A01G123800.1	Wheat	nucleus	55.5	62.7
Os03t0313100-01	Rice	extracellular, nucleus	58.31	57.77
PGSC0003DMT400041758	Potato	nucleus	29.98	49.04
GSMUA_Achr1P24940_001	Banana	nucleus	37.0	46.88
CDX78387	Canola	nucleus	39.11	41.54
CDX97022	Canola	nucleus	38.41	40.1
KRG99477	Soybean	nucleus	40.28	39.18
KRH45549	Soybean	nucleus	40.75	38.93
VIT_00s0772g00020.t01	Wine grape	nucleus	39.58	36.9
Bra024394.1-P	Field mustard	nucleus	37.94	36.08
CDY14577	Canola	nucleus	38.17	35.9
AT5G65510.2	Thale cress	nucleus	41.45	35.54
EER88761	Sorghum	nucleus	38.88	35.02
VIT_00s1291g00010.t01	Wine grape	nucleus	41.45	34.5
KRH39470	Soybean	nucleus	40.52	33.79
KRH74476	Soybean	nucleus	40.28	33.73
KXG27285	Sorghum	nucleus	38.41	33.61
Solyc05g051380.2.1	Tomato	nucleus	39.11	33.33
Solyc11g010710.1.1	Tomato	nucleus	42.15	33.15
CDY08784	Canola	nucleus	38.41	32.09
Bra006065.1-P	Field mustard	nucleus	41.69	32.01
CDX69826	Canola	nucleus	41.69	31.79
CDY40102	Canola	nucleus	41.45	31.78
Bra028584.1-P	Field mustard	nucleus	41.69	31.62
Bra009026.1-P	Field mustard	nucleus	41.69	31.01
CDX85757	Canola	nucleus	41.45	30.57
GSMUA_Achr11P...	Banana	nucleus	38.88	30.07
AT5G10510.3	Thale cress	nucleus	41.92	29.64
KXG33588	Sorghum	plastid	27.63	29.57
OQU89519	Sorghum	plastid	27.17	29.37
EES09182	Sorghum	nucleus	28.57	29.05
OQU93137	Sorghum	nucleus	37.94	28.37
OQU80549	Sorghum	nucleus	28.1	27.27
EES19874	Sorghum	nucleus	28.1	27.09
EER93382	Sorghum	nucleus	39.58	26.08
KXG39831	Sorghum	nucleus	37.47	25.93
KXG30667	Sorghum	nucleus	41.45	25.65
PGSC0003DMT400037835	Potato	nucleus	31.15	25.48
EER89186	Sorghum	nucleus	28.57	25.0
KXG33917	Sorghum	nucleus	40.52	24.61
KXG34322	Sorghum	nucleus	39.11	24.52

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	UniProt:A0A1B6QNK8	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ncoils:Coil	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KXG39508	ProteinID:KXG39508	ProteinID:KXG39508.1
ProteinID:OQU92701.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF47
SMART:SM00380	EnsemblPlantsGene:SORBI_3001G392700	SUPFAM:SSF54171	UniParc:UPI00081AC627	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:67895847..67901749

Molecular Weight (calculated)

46200.4 Da

IEP (calculated)

8.337

GRAVY (calculated)

-0.441

Length

427 amino acids

Sequence
(BLAST)

001: MSPPTNGAIS LAYAPSSMML GAGGLTNPPL LPFDGFTDED FLAADAALLG GAGADQTLLL LPSCPGTNGG GSSAAQGLGA ALACGEVTTA VAAGSISLAG
101: QPAPGQQVLW EVMTAVAEDC NANFSPSPPS PALPLVQTTS HRTSIYRGVT RHRWTGRYEA HLWDNTCRKE GQKRKGRQVY LGGYDKEDKA ARAYDIAALK
201: YWGDNATTNF PRENYIREIQ DMQNMNRRDV VASLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFAT EQEAAEAYDI AALKFRGENA
301: VTNFEPSRYN LLAIAQREIP ILGKKLVQKP APEAEDQAAR SAPSFSHSQQ SSNSLPPYFL TNLLEPLPSQ PSLAQPLPSY DNFGFWEPPS FYRPCPCPWG
401: NPEQKVQLGR KMEIVNGLMQ LGNSAAN

Best Arabidopsis Sequence Match ( AT1G51190.1 )
(BLAST)

001: MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF
101: QTNSLLPTVV TCASNAPNNY ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT LETFGQRTSI YRGVTRHRWT
201: GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH
301: QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY
401: GAASGSSSVA SSSRLQLQPY PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL YNAYLQSNPG LLHGFVSDNN
501: NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG GATGYGGWNS GESAQGSNPG GVFTMWNE

Arabidopsis Description

PLT2AP2-like ethylene-responsive transcription factor PLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q5YGP7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.