Factsheet for Bra006065.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78387	Canola	nucleus	65.29	90.3
Bra028584.1-P	Field mustard	nucleus	88.49	87.39
Bra009026.1-P	Field mustard	nucleus	87.77	85.02
AT5G10510.3	Thale cress	nucleus	88.67	81.62
Bra024394.1-P	Field mustard	nucleus	54.68	67.71
VIT_00s0772g00020.t01	Wine grape	nucleus	55.04	66.81
VIT_00s1291g00010.t01	Wine grape	nucleus	61.33	66.47
KRH74476	Soybean	nucleus	59.53	64.9
KRH39470	Soybean	nucleus	59.53	64.65
Solyc05g051380.2.1	Tomato	nucleus	54.68	60.68
GSMUA_Achr1P24940_001	Banana	nucleus	29.86	49.26
HORVU4Hr1G052880.2	Barley	nucleus	17.81	46.48
TraesCS4B01G180600.1	Wheat	nucleus	31.12	46.13
TraesCS4D01G182100.1	Wheat	nucleus	31.12	46.01
TraesCS4A01G123800.1	Wheat	nucleus	30.94	45.5
Os03t0313100-01	Rice	extracellular, nucleus	32.91	42.46
KXG39508	Sorghum	extracellular, nucleus	32.01	41.69
Zm00001d028919_P001	Maize	extracellular, nucleus	31.65	41.41
Bra035137.1-P	Field mustard	nucleus	22.12	39.94
Bra031234.1-P	Field mustard	nucleus	39.21	39.14
Bra026082.1-P	Field mustard	nucleus	23.2	39.09
Bra008040.1-P	Field mustard	nucleus	30.76	38.86
Bra030451.1-P	Field mustard	nucleus	39.03	38.48
Bra013978.1-P	Field mustard	nucleus	39.93	38.34
Bra018899.1-P	Field mustard	nucleus	38.31	38.1
Bra023617.1-P	Field mustard	nucleus	33.99	35.26
Bra020444.1-P	Field mustard	nucleus	35.25	35.06
Bra011782.1-P	Field mustard	nucleus	32.37	33.03
Bra017852.1-P	Field mustard	nucleus	32.55	32.55
PGSC0003DMT400037835	Potato	nucleus	30.04	31.99
GSMUA_Achr11P...	Banana	nucleus	31.3	31.52
Bra007066.1-P	Field mustard	plastid	23.2	31.31
Bra010610.1-P	Field mustard	nucleus	31.12	31.28
Bra003178.1-P	Field mustard	plastid	22.66	30.51
Bra023921.1-P	Field mustard	nucleus	24.1	28.69

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra006065
EnsemblPlants:Bra006065.1	EnsemblPlants:Bra006065.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4CPC7	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF33	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000253F895	SEG:seg	:	:	:	:

Description

AT5G10510 (E=7e-215) AIL6 | AIL6 (AINTEGUMENTA-LIKE 6); DNA binding / transcription factor

Coordinates

chrA03:+:1837427..1841214

Molecular Weight (calculated)

62459.7 Da

IEP (calculated)

6.548

GRAVY (calculated)

-0.813

Length

556 amino acids

Sequence
(BLAST)

001: MAPMTNWLTF SLSPMEMLRS SDQSQFVSYD ASSAASSPYL LDNFYGWTNQ KPQEEEEAQI TASMADSTIL TSFVDSQNHS QNHIPKLEDF LGDFRYSDNS
101: QTETQDSSSL THIYDPRHHQ NQTGFYSDHS HDFKAMTGFQ TAFSTNSGSE VDDSVSMSRT HLAGEYLGHV VESSGQELGF IHGGANTGGA LSLGVNTNNT
201: NNQISEYNYR ANNNGERIIN NNNREKTDSE KEKPVVAVER SDSSNKKVAD TFGQRTSIYR GVTRHRWTGR YEAHLWDNSC RREGQARKGR QGGYDKEDKA
301: ARAYDLAALK YWNTAATTNF PITNYSKELE EMKHMTKQEF IASLRRKSSG FSRGASMYRG VTRHHQQGRW QARIGRVAGN KDLYLGTFAT EEEAAEAYDI
401: AAIKFRGINA VTNFEMNRYD VEAIMKSALP IGGAAKRLKL SLESEQKPII GHHQLHHFQQ QHQQLQSSPN DSSINFALCP SSDVQPQMIP CGIPFEAASL
501: YHHQQQQQQQ NFFQHFPANA ASDSTDSNNN SNVQSSMGLM APNAAAEFFL WPNQSY

Best Arabidopsis Sequence Match ( AT5G10510.6 )
(BLAST)

001: MMAPMTNWLT FSLSPMEMLR SSDQSQFVSY DASSAASSSP YLLDNFYGWS NQKPQEFFKE EAQLAAAASM ADSTILTTFV DPQSHHSQNH IPKLEDFLGD
101: SSSIVRYSDN SQTDTQDSSL TQIYDPRHHH NQTGFYSDHH DFKTMAGFQS AFSTNSGSEV DDSASIGRTH LAGDYLGHVV ESSGPELGFH GGSTGALSLG
201: VNVNNNTNHR NDNDNHYRGN NNGERINNNN NNDNEKTDSE KEKAVVAVET SDCSNKKIAD TFGQRTSIYR GVTRHRWTGR YEAHLWDNSC RREGQARKGR
301: QVYLGGYDKE DKAARAYDLA ALKYWNATAT TNFPITNYSK EVEEMKHMTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT
401: FATEEEAAEA YDIAAIKFRG INAVTNFEMN RYDVEAIMKS ALPIGGAAKR LKLSLEAAAS SEQKPILGHH QLHHFQQQQQ QQQLQLQSSP NHSSINFALC
501: PNSAVQSQQI IPCGIPFEAA ALYHHHQQQQ QHQQQQQQQN FFQHFPANAA SDSTGSNNNS NVQGTMGLMA PNPAEFFLWP NQSY

Arabidopsis Description

AIL6AINTEGUMENTA-like 6 [Source:UniProtKB/TrEMBL;Acc:F4KGW7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.