Factsheet for Bra028584.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40102	Canola	nucleus	96.8	97.85
CDX85757	Canola	nucleus	97.87	95.16
Bra006065.1-P	Field mustard	nucleus	87.39	88.49
Bra009026.1-P	Field mustard	nucleus	88.81	87.11
AT5G10510.3	Thale cress	nucleus	90.41	84.27
VIT_00s0772g00020.t01	Wine grape	nucleus	55.24	67.9
VIT_00s1291g00010.t01	Wine grape	nucleus	61.28	67.25
Bra024394.1-P	Field mustard	nucleus	52.93	66.37
KRH39470	Soybean	nucleus	58.97	64.84
KRH74476	Soybean	nucleus	58.44	64.51
Solyc05g051380.2.1	Tomato	nucleus	53.46	60.08
GSMUA_Achr1P24940_001	Banana	nucleus	29.84	49.85
HORVU4Hr1G052880.2	Barley	nucleus	17.58	46.48
TraesCS4D01G182100.1	Wheat	nucleus	30.55	45.74
TraesCS4B01G180600.1	Wheat	nucleus	30.37	45.6
TraesCS4A01G123800.1	Wheat	nucleus	30.2	44.97
Os03t0313100-01	Rice	extracellular, nucleus	32.5	42.46
KXG39508	Sorghum	extracellular, nucleus	31.62	41.69
Zm00001d028919_P001	Maize	extracellular, nucleus	31.44	41.65
Bra035137.1-P	Field mustard	nucleus	21.85	39.94
Bra026082.1-P	Field mustard	nucleus	22.91	39.09
Bra008040.1-P	Field mustard	nucleus	30.37	38.86
Bra031234.1-P	Field mustard	nucleus	38.19	38.6
Bra013978.1-P	Field mustard	nucleus	39.25	38.17
Bra030451.1-P	Field mustard	nucleus	38.19	38.12
Bra018899.1-P	Field mustard	nucleus	37.66	37.92
Bra023617.1-P	Field mustard	nucleus	33.75	35.45
Bra020444.1-P	Field mustard	nucleus	34.28	34.53
Bra011782.1-P	Field mustard	nucleus	32.5	33.58
Bra017852.1-P	Field mustard	nucleus	32.68	33.09
Bra010610.1-P	Field mustard	nucleus	31.26	31.83
GSMUA_Achr11P...	Banana	nucleus	31.08	31.7
PGSC0003DMT400037835	Potato	nucleus	29.31	31.61
Bra007066.1-P	Field mustard	plastid	23.09	31.55
Bra003178.1-P	Field mustard	plastid	22.38	30.51
Bra023921.1-P	Field mustard	nucleus	23.45	28.27

Protein Annotations

MapMan:15.5.7.3	Gene3D:3.30.730.10	InterPro:AP2-like_transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra028584
EnsemblPlants:Bra028584.1	EnsemblPlants:Bra028584.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:M4EIG9	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR32467	PANTHER:PTHR32467:SF33	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00025434E7	SEG:seg	:	:	:	:

Description

AT5G10510 (E=3e-232) AIL6 | AIL6 (AINTEGUMENTA-LIKE 6); DNA binding / transcription factor

Coordinates

chrA02:-:1155678..1159305

Molecular Weight (calculated)

63284.8 Da

IEP (calculated)

6.896

GRAVY (calculated)

-0.826

Length

563 amino acids

Sequence
(BLAST)

001: MAPMTNWLTF SLSPMDMLRS SDQSQFVSYD ASSAASSSPY LLDNFYGWTN QKPQEFFKDE AQIAASMADS TILTTFVDPQ THSHNHIPKL EDFLGEVRYS
101: DNSQTETQDS SSLTHIYDPR HHQNQNQTGF YSDHNHEFKT MAGFQTAFST NSGSEVEDSA SIGRTHLAGE YLGHVVESSG GPELGFHGGA NNGGALSLGV
201: NVNNSNHRTS DDHTQITEHH YRGNNNGERI NNEKMVSEKE KPVVAVETSD CSNKKIADTF GQRTSIYRGV TRHRWTGRYE AHLWDNSCRR EGQARKGRQG
301: GYDKEDKAAR AYDLAALKYW NATATTNFPI TNYSKELEEM KHMTKQEFIA SLRRKSSGFS RGASIYRGVT RHHQQGRWQA RIGRVAGNKD LYLGTFATEE
401: EAAEAYDIAA IKFRGINAVT NFEMNRYDIE AIMKSALPIG GAAKRLKLSL EAAEQKPILG HQHQLHHFQQ QQQQQIQSSP NHSSINFAQS QMIPCGIPFE
501: AAALYHHQQQ QQQQQQQNFF QHFPANVQAS DSTGSNNNSN VQGSMGLMTP NQAEFFLWPN QSY

Best Arabidopsis Sequence Match ( AT5G10510.6 )
(BLAST)

001: MMAPMTNWLT FSLSPMEMLR SSDQSQFVSY DASSAASSSP YLLDNFYGWS NQKPQEFFKE EAQLAAAASM ADSTILTTFV DPQSHHSQNH IPKLEDFLGD
101: SSSIVRYSDN SQTDTQDSSL TQIYDPRHHH NQTGFYSDHH DFKTMAGFQS AFSTNSGSEV DDSASIGRTH LAGDYLGHVV ESSGPELGFH GGSTGALSLG
201: VNVNNNTNHR NDNDNHYRGN NNGERINNNN NNDNEKTDSE KEKAVVAVET SDCSNKKIAD TFGQRTSIYR GVTRHRWTGR YEAHLWDNSC RREGQARKGR
301: QVYLGGYDKE DKAARAYDLA ALKYWNATAT TNFPITNYSK EVEEMKHMTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT
401: FATEEEAAEA YDIAAIKFRG INAVTNFEMN RYDVEAIMKS ALPIGGAAKR LKLSLEAAAS SEQKPILGHH QLHHFQQQQQ QQQLQLQSSP NHSSINFALC
501: PNSAVQSQQI IPCGIPFEAA ALYHHHQQQQ QHQQQQQQQN FFQHFPANAA SDSTGSNNNS NVQGTMGLMA PNPAEFFLWP NQSY

Arabidopsis Description

AIL6AINTEGUMENTA-like 6 [Source:UniProtKB/TrEMBL;Acc:F4KGW7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.